RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SCFD1Q8WVM8 642 aa11.36□□□□□ -0.59
USP3-219ENST00000561326 SPIRE2Q8WWL2 714 aa11.36□□□□□ -0.59
USP3-219ENST00000561326 HVCN1Q96D96 273 aa11.36□□□□□ -0.59
USP3-219ENST00000561326 NTPCRQ9BSD7 190 aaKnown RBP11.36□□□□□ -0.59
USP3-219ENST00000561326 SEMA6BQ9H3T3 888 aa11.36□□□□□ -0.59
USP3-219ENST00000561326 ST6GALNAC4Q9H4F1 302 aa11.36□□□□□ -0.59
USP3-219ENST00000561326 TUT1Q9H6E5 874 aaKnown RBP11.36□□□□□ -0.59
USP3-219ENST00000561326 DHX33Q9H6R0 707 aaKnown RBP11.36□□□□□ -0.59
USP3-219ENST00000561326 TMEM206Q9H813 350 aa11.36□□□□□ -0.59
USP3-219ENST00000561326 POLD4Q9HCU8 107 aa11.36□□□□□ -0.59
USP3-219ENST00000561326 SAMSN1Q9NSI8 373 aaKnown RBP11.36□□□□□ -0.59
USP3-219ENST00000561326 THSD7BQ9C0I4 1608 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 RRN3P2A6NIE6 340 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 GOLGA6L6A8MZA4 724 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 K7ENM7 598 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 ADCY3O60266 1144 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 ZEB2O60315 1214 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 GNA14O95837 355 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 HOXD8P13378 290 aaPredicted RBP11.35□□□□□ -0.59
USP3-219ENST00000561326 ZNF18P17022 549 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 HSPA6P17066 643 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 EEF1GP26641 437 aaKnown RBP11.35□□□□□ -0.59
USP3-219ENST00000561326 NMT1P30419 496 aaKnown RBP11.35□□□□□ -0.59
USP3-219ENST00000561326 ZNF75DP51815 510 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 PEX3P56589 373 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 MAPK7Q13164 816 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 MXD4Q14582 209 aaPredicted RBP11.35□□□□□ -0.59
USP3-219ENST00000561326 BMT2Q1RMZ1 405 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 EDRF1Q3B7T1 1238 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 CDKAL1Q5VV42 579 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 HS2ST1Q7LGA3 356 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 HAUS6Q7Z4H7 955 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 NELFCDQ8IXH7 590 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 SYCP3Q8IZU3 236 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 DAW1Q8N136 415 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 PXYLP1Q8TE99 480 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 TRIB2Q92519 343 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 MRFAP1L1Q96HT8 127 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 CEP63Q96MT8 703 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 ACCSQ96QU6 501 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 MED15Q96RN5 788 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 PPP1R9BQ96SB3 815 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 KMT5AQ9NQR1 393 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 IFNKQ9P0W0 207 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 CGNQ9P2M7 1197 aaKnown RBP11.35□□□□□ -0.59
USP3-219ENST00000561326 EXOC7Q9UPT5 735 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 COL1A2P08123 1366 aa11.35□□□□□ -0.59
USP3-219ENST00000561326 TRIM49BA6NDI0 452 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 LRRC10BA6NIK2 292 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 KCNJ18B7U540 433 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 CETN3O15182 167 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 ASAP2O43150 1006 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 SEPT4O43236 478 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 PRPF6O94906 941 aaKnown RBP11.34□□□□□ -0.59
USP3-219ENST00000561326 HMGCRP04035 888 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 MYBP10242 640 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 RARBP10826 455 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 CYBAP13498 195 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 TMOD1P28289 359 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 CDC25BP30305 580 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 ARL2P36404 184 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 NPTX2P47972 431 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 PMS1P54277 932 aaKnown RBP11.34□□□□□ -0.59
USP3-219ENST00000561326 SNRPFP62306 86 aaKnown RBP11.34□□□□□ -0.59
USP3-219ENST00000561326 GTF2BQ00403 316 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 KCNJ12Q14500 433 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 TCP11X2Q5H9J9 407 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 TRIM50Q86XT4 487 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 GLIS3Q8NEA6 775 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 DUSP9Q99956 384 aaKnown RBP11.34□□□□□ -0.59
USP3-219ENST00000561326 C16orf70Q9BSU1 422 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 KATNAL1Q9BW62 490 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 POLR3FQ9H1D9 316 aaPredicted RBP11.34□□□□□ -0.59
USP3-219ENST00000561326 HSD3B7Q9H2F3 369 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 RNPEPQ9H4A4 650 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 SUGCTQ9HAC7 445 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 GPRC5CQ9NQ84 441 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 TYW1Q9NV66 732 aaKnown RBP11.34□□□□□ -0.59
USP3-219ENST00000561326 TRAF3IP3Q9Y228 551 aa11.34□□□□□ -0.59
USP3-219ENST00000561326 SLC16A4O15374 487 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 PTMAP06454 111 aaKnown RBP11.33□□□□□ -0.6
USP3-219ENST00000561326 ATP1A3P13637 1013 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 INSRRP14616 1297 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 KLRC1P26715 233 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 NAMPTP43490 491 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 MTIF2P46199 727 aaKnown RBP11.33□□□□□ -0.6
USP3-219ENST00000561326 CASP5P51878 434 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 NCKAP1LP55160 1127 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 GJA9P57773 515 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 CACNB2Q08289 660 aaPredicted RBP11.33□□□□□ -0.6
USP3-219ENST00000561326 ADAM9Q13443 819 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 TFDP1Q14186 410 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 FSCN1Q16658 493 aaKnown RBP11.33□□□□□ -0.6
USP3-219ENST00000561326 ZC2HC1CQ53FD0 456 aaPredicted RBP11.33□□□□□ -0.6
USP3-219ENST00000561326 HSP90AA4PQ58FG1 418 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 GNASQ5JWF2 1037 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 EFCAB12Q6NXP0 572 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 FILIP1Q7Z7B0 1213 aa11.33□□□□□ -0.6
USP3-219ENST00000561326 DEPTORQ8TB45 409 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms