RNA–Protein interactions for RNA: ENST00000560788.1

PSME2-215, Transcript of proteasome activator subunit 2, human

TSL 2

Gene PSME2, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME2-215	ENST00000560788	NONO	Q15233	471 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
PSME2-215	ENST00000560788	CLLU1OS	Q5K130	101 aa		13.86	□□□□□ -0.19
PSME2-215	ENST00000560788	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.86	□□□□□ -0.19
PSME2-215	ENST00000560788	FAM228A	Q86W67	206 aa		13.86	□□□□□ -0.19
PSME2-215	ENST00000560788	TMEM173	Q86WV6	379 aa	Predicted RBP	13.86	□□□□□ -0.19
PSME2-215	ENST00000560788	ZBTB44	Q8NCP5	570 aa		13.86	□□□□□ -0.19
PSME2-215	ENST00000560788	SECISBP2L	Q93073	1101 aa	Known RBP	13.86	□□□□□ -0.19
PSME2-215	ENST00000560788	FBXO4	Q9UKT5	387 aa		13.86	□□□□□ -0.19
PSME2-215	ENST00000560788	PALM3	A6NDB9	673 aa	Predicted RBP	13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	SLC30A4	O14863	429 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	LILRB5	O75023	590 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	CTSA	P10619	480 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	ITGB5	P18084	799 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	BCAR1	P56945	870 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	DMWD	Q09019	674 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	BMS1	Q14692	1282 aa	Known RBP	13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	WTAP	Q15007	396 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	MCMDC2	Q4G0Z9	681 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	ODR4	Q5SWX8	454 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	DCLRE1A	Q6PJP8	1040 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	C15orf39	Q6ZRI6	1047 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	KIAA0319L	Q8IZA0	1049 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	ABI1	Q8IZP0	508 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	TMEM87A	Q8NBN3	555 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	ATRIP	Q8WXE1	791 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	GPRASP2	Q96D09	838 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	PKD2L1	Q9P0L9	805 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	EPS15L1	Q9UBC2	864 aa		13.85	□□□□□ -0.19
PSME2-215	ENST00000560788	DSP	P15924	2871 aa	Known RBP	13.85	□□□□□ -0.19
PSME2-215	ENST00000560788		B4E1Z4	1266 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	KLRC1	P26715	233 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	GBP2	P32456	591 aa	Predicted RBP	13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	STARD6	P59095	220 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	CSTF1	Q05048	431 aa	Known RBP	13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	TRAF1	Q13077	416 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	GIT2	Q14161	759 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	PTPN14	Q15678	1187 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	PPFIBP1	Q86W92	1011 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	NELL1	Q92832	810 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	TMEM169	Q96HH4	297 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	MYADM	Q96S97	322 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	RIOX1	Q9H6W3	641 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	ZSWIM5	Q9P217	1185 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	ANGPTL2	Q9UKU9	493 aa		13.84	□□□□□ -0.19
PSME2-215	ENST00000560788	LAMTOR5	O43504	91 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	CYTH3	O43739	400 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	ALDH7A1	P49419	539 aa	Known RBP	13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	NT5C2	P49902	561 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	CLCN4	P51793	760 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	POLG	P54098	1239 aa	Predicted RBP	13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	KIZ	Q2M2Z5	673 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	USP17L6P	Q6QN14	398 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	DDX53	Q86TM3	631 aa	Known RBP	13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	ECHDC2	Q86YB7	292 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	NETO1	Q8TDF5	533 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	TNPO1	Q92973	898 aa	Known RBP	13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	NXPE3	Q969Y0	559 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	CDHR1	Q96JP9	859 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	PPP1R16B	Q96T49	567 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	OSMR	Q99650	979 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	VN1R3	Q9BXE9	311 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	CHMP4B	Q9H444	224 aa	Known RBP	13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	AZI2	Q9H6S1	392 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	WDR6	Q9NNW5	1121 aa	Known RBP	13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	SLC2A4RG	Q9NR83	387 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	ZSCAN32	Q9NX65	697 aa		13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.83	□□□□□ -0.2
PSME2-215	ENST00000560788	GREB1	Q4ZG55	1949 aa		13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	PNMA6F	A0A0J9YX94	578 aa		13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	SPDYE4	A6NLX3	237 aa		13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	MEIS2	O14770	477 aa		13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	MX1	P20591	662 aa		13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	PML	P29590	882 aa		13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	CRYBB1	P53674	252 aa	Predicted RBP	13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	PLPPR4	Q7Z2D5	763 aa		13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	HELQ	Q8TDG4	1101 aa		13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	EVI5L	Q96CN4	794 aa		13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	KLHL5	Q96PQ7	755 aa		13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	MTF2	Q9Y483	593 aa	Predicted RBP	13.82	□□□□□ -0.2
PSME2-215	ENST00000560788	AKAP13	Q12802	2813 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	ANHX	E9PGG2	379 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	ZNF213	O14771	459 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	TBC1D4	O60343	1298 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	GPR32	O75388	356 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	STAT5B	P51692	787 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	SPEM2	Q0P670	501 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	MTMR1	Q13613	665 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	IFIT1B	Q5T764	474 aa	Known RBP	13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	ZNF598	Q86UK7	904 aa	Known RBP	13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	RNF169	Q8NCN4	708 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	CMAS	Q8NFW8	434 aa	Predicted RBP	13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	SMARCC2	Q8TAQ2	1214 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	IGSF21	Q96ID5	467 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	DDX23	Q9BUQ8	820 aa	Known RBP	13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	BCO2	Q9BYV7	579 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	JPH1	Q9HDC5	661 aa	Predicted RBP	13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	SLC9A2	Q9UBY0	812 aa		13.81	□□□□□ -0.2
PSME2-215	ENST00000560788	UBIAD1	Q9Y5Z9	338 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms