RNA–Protein interactions for RNA: ENST00000560779.5

RMDN3-210, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 3

Gene RMDN3, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-210ENST00000560779 CDHR5Q9HBB8 845 aa14.99□□□□□ -0.01
RMDN3-210ENST00000560779 ERVK-5Q9HDB9 667 aa14.99□□□□□ -0.01
RMDN3-210ENST00000560779 DDX19AQ9NUU7 478 aaKnown RBP14.99□□□□□ -0.01
RMDN3-210ENST00000560779 PADI3Q9ULW8 664 aa14.99□□□□□ -0.01
RMDN3-210ENST00000560779 KIAA1024Q9UPX6 916 aa14.99□□□□□ -0.01
RMDN3-210ENST00000560779 GINS2Q9Y248 185 aa14.99□□□□□ -0.01
RMDN3-210ENST00000560779 NOC2LQ9Y3T9 749 aaKnown RBP14.99□□□□□ -0.01
RMDN3-210ENST00000560779 PCDHA11Q9Y5I1 949 aa14.99□□□□□ -0.01
RMDN3-210ENST00000560779 COL4A3BPQ9Y5P4 624 aa14.99□□□□□ -0.01
RMDN3-210ENST00000560779 CLIC4Q9Y696 253 aa14.99□□□□□ -0.01
RMDN3-210ENST00000560779 RALGAPA2Q2PPJ7 1873 aa14.99□□□□□ -0.01
RMDN3-210ENST00000560779 ARHGEF35A5YM69 484 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 PP2D1A8MPX8 630 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 DARSP14868 501 aaKnown RBP14.98□□□□□ -0.01
RMDN3-210ENST00000560779 DNAJB2P25686 324 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 POU5F1BQ06416 359 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 MXD4Q14582 209 aaPredicted RBP14.98□□□□□ -0.01
RMDN3-210ENST00000560779 SLC39A14Q15043 492 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 ECM1Q16610 540 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 RHPN2Q8IUC4 686 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 HERC6Q8IVU3 1022 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 NLRP7Q8WX94 980 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 SCLT1Q96NL6 688 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 PBX4Q9BYU1 374 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 GCOM2Q9BZD3 368 aaPredicted RBP14.98□□□□□ -0.01
RMDN3-210ENST00000560779 MSRAQ9UJ68 235 aa14.98□□□□□ -0.01
RMDN3-210ENST00000560779 SRPRBQ9Y5M8 271 aaKnown RBP14.98□□□□□ -0.01
RMDN3-210ENST00000560779 FNDC1Q4ZHG4 1894 aaPredicted RBP14.97□□□□□ -0.01
RMDN3-210ENST00000560779 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.97□□□□□ -0.01
RMDN3-210ENST00000560779 USO1O60763 962 aaKnown RBP14.97□□□□□ -0.01
RMDN3-210ENST00000560779 YEATS4O95619 227 aa14.97□□□□□ -0.01
RMDN3-210ENST00000560779 EYA4O95677 639 aa14.97□□□□□ -0.01
RMDN3-210ENST00000560779 CDC25AP30304 524 aa14.97□□□□□ -0.01
RMDN3-210ENST00000560779 UBA7P41226 1012 aa14.97□□□□□ -0.01
RMDN3-210ENST00000560779 DEFB103AP81534 67 aa14.97□□□□□ -0.01
RMDN3-210ENST00000560779 FAM228AQ86W67 206 aa14.97□□□□□ -0.01
RMDN3-210ENST00000560779 PRPF31Q8WWY3 499 aaKnown RBP14.97□□□□□ -0.01
RMDN3-210ENST00000560779 PPP1R16BQ96T49 567 aa14.97□□□□□ -0.01
RMDN3-210ENST00000560779 TSPYL2Q9H2G4 693 aaPredicted RBP14.97□□□□□ -0.01
RMDN3-210ENST00000560779 BHMT2Q9H2M3 363 aa14.97□□□□□ -0.01
RMDN3-210ENST00000560779 FBXO2Q9UK22 296 aaPredicted RBP14.97□□□□□ -0.01
RMDN3-210ENST00000560779 ST3GAL5Q9UNP4 418 aa14.97□□□□□ -0.01
RMDN3-210ENST00000560779 DNM3Q9UQ16 869 aa14.97□□□□□ -0.01
RMDN3-210ENST00000560779 A0A087WZ62 844 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 GRXCR1A8MXD5 290 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 GJB5O95377 273 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 BRD1O95696 1058 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 CYP11B2P19099 503 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 SFPQP23246 707 aaKnown RBP eCLIP14.96□□□□□ -0.01
RMDN3-210ENST00000560779 ARL2P36404 184 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 LAMTOR4Q0VGL1 99 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 NFX1Q12986 1120 aaKnown RBP14.96□□□□□ -0.01
RMDN3-210ENST00000560779 GRB10Q13322 594 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 PKP1Q13835 747 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 TFDP1Q14186 410 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 TMEM119Q4V9L6 283 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 PADI6Q6TGC4 694 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.96□□□□□ -0.01
RMDN3-210ENST00000560779 SRGAP1Q7Z6B7 1085 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 CABP7Q86V35 215 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 IFNLR1Q8IU57 520 aaPredicted RBP14.96□□□□□ -0.01
RMDN3-210ENST00000560779 LINC00301Q8NCQ3 95 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 TOP1MTQ969P6 601 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 TMEM143Q96AN5 459 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 CALML4Q96GE6 196 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 CDK5RAP3Q96JB5 506 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 NLRP4Q96MN2 994 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 FDXACB1Q9BRP7 624 aaPredicted RBP14.96□□□□□ -0.01
RMDN3-210ENST00000560779 CCSER1Q9C0I3 900 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 C1orf112Q9NSG2 853 aa14.96□□□□□ -0.01
RMDN3-210ENST00000560779 BMP2KQ9NSY1 1161 aaPredicted RBP14.96□□□□□ -0.01
RMDN3-210ENST00000560779 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
RMDN3-210ENST00000560779 LAMA2P24043 3122 aaKnown RBP14.96□□□□□ -0.02
RMDN3-210ENST00000560779 ENPP3O14638 875 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 PPP6R2O75170 966 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 CEBPZQ03701 1054 aaKnown RBP14.95□□□□□ -0.02
RMDN3-210ENST00000560779 GRIN1Q05586 938 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 STK38Q15208 465 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 PCBP1Q15365 356 aaKnown RBP eCLIP14.95□□□□□ -0.02
RMDN3-210ENST00000560779 ZNF697Q5TEC3 545 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 MYOCDQ8IZQ8 938 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 LINC01599Q8WXQ3 324 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 TIFAQ96CG3 184 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 PNMA5Q96PV4 448 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 NFKBIZQ9BYH8 718 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 TMX1Q9H3N1 280 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 IFT122Q9HBG6 1241 aa14.95□□□□□ -0.02
RMDN3-210ENST00000560779 KIAA1671Q9BY89 1806 aa14.94□□□□□ -0.02
RMDN3-210ENST00000560779 A0A087WWV3 80 aa14.94□□□□□ -0.02
RMDN3-210ENST00000560779 E9PMD0 336 aa14.94□□□□□ -0.02
RMDN3-210ENST00000560779 SPTLC2O15270 562 aa14.94□□□□□ -0.02
RMDN3-210ENST00000560779 TLL1O43897 1013 aa14.94□□□□□ -0.02
RMDN3-210ENST00000560779 MARCKSP29966 332 aaPredicted RBP14.94□□□□□ -0.02
RMDN3-210ENST00000560779 TXLNAP40222 546 aa14.94□□□□□ -0.02
RMDN3-210ENST00000560779 PBX2P40425 430 aa14.94□□□□□ -0.02
RMDN3-210ENST00000560779 PHKA2P46019 1235 aa14.94□□□□□ -0.02
RMDN3-210ENST00000560779 HTRA4P83105 476 aaPredicted RBP14.94□□□□□ -0.02
RMDN3-210ENST00000560779 DSC3Q14574 896 aa14.94□□□□□ -0.02
RMDN3-210ENST00000560779 RTN4RL1Q86UN2 441 aaPredicted RBP14.94□□□□□ -0.02
RMDN3-210ENST00000560779 KSR1Q8IVT5 923 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms