RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 DTLQ9NZJ0 730 aa5.49□□□□□ -1.53
TMOD3-207ENST00000560549 MYOTQ9UBF9 498 aa5.49□□□□□ -1.53
TMOD3-207ENST00000560549 TNNQ9UQP3 1299 aa5.49□□□□□ -1.53
TMOD3-207ENST00000560549 ATP7BP35670 1465 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 TCRBV5S4A2TA0A5A2 114 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 FAM83GA6ND36 823 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 SLC27A2O14975 620 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 PRICKLE3O43900 615 aaPredicted RBP5.48□□□□□ -1.53
TMOD3-207ENST00000560549 DGKIO75912 1065 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 COL6A2P12110 1019 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 GRK2P25098 689 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 IL13P35225 146 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 GRK3P35626 688 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 TMPOP42166 694 aaKnown RBP5.48□□□□□ -1.53
TMOD3-207ENST00000560549 ZC3H12BQ5HYM0 836 aaKnown RBP5.48□□□□□ -1.53
TMOD3-207ENST00000560549 HABP4Q5JVS0 413 aaKnown RBP5.48□□□□□ -1.53
TMOD3-207ENST00000560549 TEPPQ6URK8 271 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 OTOP3Q7RTS5 596 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 PROSER1Q86XN7 944 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 TICAM2Q86XR7 235 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 CLEC4DQ8WXI8 215 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 ZSWIM3Q96MP5 696 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 IPPKQ9H8X2 491 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 SLC6A20Q9NP91 592 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 CHPF2Q9P2E5 772 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 MAGEC2Q9UBF1 373 aaPredicted RBP5.48□□□□□ -1.53
TMOD3-207ENST00000560549 ASH2LQ9UBL3 628 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 DUSP10Q9Y6W6 482 aa5.48□□□□□ -1.53
TMOD3-207ENST00000560549 EDC4Q6P2E9 1401 aaKnown RBP5.48□□□□□ -1.53
TMOD3-207ENST00000560549 XRN1Q8IZH2 1706 aaKnown RBP5.48□□□□□ -1.53
TMOD3-207ENST00000560549 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.48□□□□□ -1.53
TMOD3-207ENST00000560549 TMEM94Q12767 1356 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 ACEP12821 1306 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 TTC21BQ7Z4L5 1316 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 NOBOXO60393 691 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 MAP4K4O95819 1239 aaPredicted RBP5.47□□□□□ -1.53
TMOD3-207ENST00000560549 RARSP54136 660 aaKnown RBP5.47□□□□□ -1.53
TMOD3-207ENST00000560549 GPR85P60893 370 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 RRS1Q15050 365 aaKnown RBP5.47□□□□□ -1.53
TMOD3-207ENST00000560549 TCEA2Q15560 299 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 PLEKHG6Q3KR16 790 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 GORABQ5T7V8 394 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 ZNF761Q86XN6 746 aaPredicted RBP5.47□□□□□ -1.53
TMOD3-207ENST00000560549 SCUBE1Q8IWY4 988 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 EXOC8Q8IYI6 725 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 SH3RF2Q8TEC5 729 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 PHACTR3Q96KR7 559 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 KCNJ15Q99712 375 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 PCDH18Q9HCL0 1135 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 NCOA3Q9Y6Q9 1424 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 CDC42BPGQ6DT37 1551 aa5.47□□□□□ -1.53
TMOD3-207ENST00000560549 CCDC194A0A1B0GVG4 234 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 SOD2P04179 222 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 GRIN1Q05586 938 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 PABPC4Q13310 644 aaKnown RBP eCLIP5.46□□□□□ -1.532e-6■□□□□ 9.8
TMOD3-207ENST00000560549 KIZQ2M2Z5 673 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 TRIM61Q5EBN2 209 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 NT5DC1Q5TFE4 455 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 FILIP1Q7Z7B0 1213 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 SYNPOQ8N3V7 929 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 KYQ8NBH2 561 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 SLC7A14Q8TBB6 771 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 TSR2Q969E8 191 aaKnown RBP5.46□□□□□ -1.53
TMOD3-207ENST00000560549 CDC6Q99741 560 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 KRTAP4-5Q9BYR2 181 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 SMOC1Q9H4F8 434 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 TRIM39Q9HCM9 518 aa5.46□□□□□ -1.53
TMOD3-207ENST00000560549 CNOT11Q9UKZ1 510 aaKnown RBP5.46□□□□□ -1.53
TMOD3-207ENST00000560549 SSH2Q76I76 1423 aa5.46□□□□□ -1.54
TMOD3-207ENST00000560549 MSH6P52701 1360 aa5.46□□□□□ -1.54
TMOD3-207ENST00000560549 KNDC1Q76NI1 1749 aa5.46□□□□□ -1.54
TMOD3-207ENST00000560549 A0A087X0B3 334 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 PLD2O14939 933 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 KCNQ2O43526 872 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 RFPL3O75679 317 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 CELA3BP08861 270 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 HMOX1P09601 288 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 SDSP20132 328 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 PRKAR2BP31323 418 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 MASP1P48740 699 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 RIPK4P57078 832 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 SUMO1P63165 101 aaKnown RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 NFKB2Q00653 900 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 EFEMP1Q12805 493 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 CHRNA2Q15822 529 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 TM4SF20Q53R12 229 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 PHF19Q5T6S3 580 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 IFNL3Q8IZI9 196 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 GSTCDQ8NEC7 633 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 UHMK1Q8TAS1 419 aaKnown RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.45□□□□□ -1.541e-6■■■■■ 31.9
TMOD3-207ENST00000560549 ADAMTS17Q8TE56 1095 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 STAG1Q8WVM7 1258 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 NINJ1Q92982 152 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 TOE1Q96GM8 510 aaKnown RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 SCLYQ96I15 445 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 COG3Q96JB2 828 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 ZFYVE21Q9BQ24 234 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 THUMPD2Q9BTF0 503 aaKnown RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 FAM126AQ9BYI3 521 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms