RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 SPIRE2Q8WWL2 714 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 TCP11Q8WWU5 503 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 TRIB2Q92519 343 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 KCNN1Q92952 543 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 MRFAP1L1Q96HT8 127 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 IFT74Q96LB3 600 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 PPP1R9BQ96SB3 815 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 FIZ1Q96SL8 496 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 C16orf70Q9BSU1 422 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 BEGAINQ9BUH8 593 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 STRA6Q9BX79 667 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 SEMA6BQ9H3T3 888 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 TUT1Q9H6E5 874 aaKnown RBP9.5□□□□□ -0.89
TRAF3-209ENST00000560463 TBC1D7Q9P0N9 293 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 CGNQ9P2M7 1197 aaKnown RBP9.5□□□□□ -0.89
TRAF3-209ENST00000560463 TRAF3IP3Q9Y228 551 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 RALGAPA2Q2PPJ7 1873 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 IGKV6-21A0A0C4DH24 114 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 TRIM49BA6NDI0 452 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 LRRC10BA6NIK2 292 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 SFI1A8K8P3 1242 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 MAGEB2O15479 319 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 SEPT4O43236 478 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 DYNC1LI2O43237 492 aaPredicted RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 ADCY6O43306 1168 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 CALUO43852 315 aaPredicted RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 PPP1R37O75864 691 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 HMGCRP04035 888 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 HSPA6P17066 643 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 NMT1P30419 496 aaKnown RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 HOXD11P31277 338 aaPredicted RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 ZNF75DP51815 510 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 SNRPFP62306 86 aaKnown RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 GTF2BQ00403 316 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 FANCCQ00597 558 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 FKBP3Q00688 224 aaKnown RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 DMP1Q13316 513 aaPredicted RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 LRRC41Q15345 812 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 NFIL3Q16649 462 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 IER5Q5VY09 327 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 CSGALNACT2Q8N6G5 542 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 RETREG2Q8NC44 543 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 GOLGA5Q8TBA6 731 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 CEP63Q96MT8 703 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 DUSP9Q99956 384 aaKnown RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 SH2D3AQ9BRG2 576 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 SRRTQ9BXP5 876 aaKnown RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 KCTD10Q9H3F6 313 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 TMEM206Q9H813 350 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 SPC25Q9HBM1 224 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 XPNPEP1Q9NQW7 623 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 SAMSN1Q9NSI8 373 aaKnown RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 TYW1Q9NV66 732 aaKnown RBP9.49□□□□□ -0.89
TRAF3-209ENST00000560463 TRPC6Q9Y210 931 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 PHLPP2Q6ZVD8 1323 aa9.49□□□□□ -0.89
TRAF3-209ENST00000560463 CENPFP49454 3210 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 RRN3P2A6NIE6 340 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 ZBTB42B2RXF5 422 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 K7ENM7 598 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 ASAP2O43150 1006 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 AP5Z1O43299 807 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 ADCY3O60266 1144 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 GNA14O95837 355 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 SERPINC1P01008 464 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 MYBP10242 640 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 ATP1A3P13637 1013 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 PRKCSHP14314 528 aaPredicted RBP9.48□□□□□ -0.89
TRAF3-209ENST00000560463 RPL13P26373 211 aaKnown RBP9.48□□□□□ -0.89
TRAF3-209ENST00000560463 MARK3P27448 753 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 ARL2P36404 184 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 DNM2P50570 870 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 CASP5P51878 434 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 PMS1P54277 932 aaKnown RBP9.48□□□□□ -0.89
TRAF3-209ENST00000560463 PEX3P56589 373 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 UBASH3AP57075 661 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 GJA9P57773 515 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 NKX3-2P78367 333 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 HTRA3P83110 453 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 CACNB2Q08289 660 aaPredicted RBP9.48□□□□□ -0.89
TRAF3-209ENST00000560463 MXD4Q14582 209 aaPredicted RBP9.48□□□□□ -0.89
TRAF3-209ENST00000560463 FILIP1LQ4L180 1135 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 ZCWPW2Q504Y3 356 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 TCP11X2Q5H9J9 407 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 MAEAQ7L5Y9 396 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 HAUS6Q7Z4H7 955 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 TRIM50Q86XT4 487 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 ZC3H3Q8IXZ2 948 aaKnown RBP9.48□□□□□ -0.89
TRAF3-209ENST00000560463 SLAIN1Q8ND83 568 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 GLIS3Q8NEA6 775 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 TRPV1Q8NER1 839 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 RAET1EQ8TD07 263 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 TMEM174Q8WUU8 243 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 ACCSQ96QU6 501 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 KATNAL1Q9BW62 490 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 GBP3Q9H0R5 595 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 UPF3AQ9H1J1 476 aaKnown RBP9.48□□□□□ -0.89
TRAF3-209ENST00000560463 RNPEPQ9H4A4 650 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 POLD4Q9HCU8 107 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 KMT5AQ9NQR1 393 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 LIMA1Q9UHB6 759 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms