RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 KIF3AQ9Y496 699 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 STAG3L1P0CL83 205 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 CLCN3P51790 818 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 CRYBB1P53674 252 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 TBC1D8BQ0IIM8 1120 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 BTG3Q14201 252 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 ODR4Q5SWX8 454 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 LRRC71Q8N4P6 559 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 TMEM40Q8WWA1 233 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 HSD17B14Q9BPX1 270 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 TMEM60Q9H2L4 133 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 ADAMTS10Q9H324 1103 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 TTC12Q9H892 705 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 ERVK-5Q9HDB9 667 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 WRAP73Q9P2S5 460 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 SEPT9Q9UHD8 586 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 PPME1Q9Y570 386 aa17.01■□□□□ 0.31
SNRPA1-210ENST00000560383 TMEM150BA6NC51 233 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 DDX11L8A8MPP1 907 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 NCK2O43639 380 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 MAFO75444 373 aaPredicted RBP17■□□□□ 0.31
SNRPA1-210ENST00000560383 SLITRK3O94933 977 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 VTNP04004 478 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 KCNA5P22460 613 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 KIZQ2M2Z5 673 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 PUS10Q3MIT2 529 aaKnown RBP17■□□□□ 0.31
SNRPA1-210ENST00000560383 NAALADL2Q58DX5 795 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 RTN4RL1Q86UN2 441 aaPredicted RBP17■□□□□ 0.31
SNRPA1-210ENST00000560383 NEK9Q8TD19 979 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 P2RX5Q93086 422 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 PABPC5Q96DU9 382 aaKnown RBP17■□□□□ 0.31
SNRPA1-210ENST00000560383 MAP7D2Q96T17 732 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 LXNQ9BS40 222 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 C1QTNF1Q9BXJ1 281 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 TMX1Q9H3N1 280 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 RGL1Q9NZL6 768 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 NOC2LQ9Y3T9 749 aaKnown RBP17■□□□□ 0.31
SNRPA1-210ENST00000560383 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
SNRPA1-210ENST00000560383 RPS6KA5O75582 802 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 LYPLA2O95372 231 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 MCM7P33993 719 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 TXKP42681 527 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 NLRP11P59045 1033 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 CDC42EP1Q00587 391 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 MTERF2Q49AM1 385 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 TCEAL5Q5H9L2 206 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 DYDC2Q96IM9 177 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 OSMRQ99650 979 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 CYP26B1Q9NR63 512 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 GINS2Q9Y248 185 aa16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 FNDC1Q4ZHG4 1894 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-210ENST00000560383 C5orf42Q9H799 3197 aa16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 GPR182O15218 404 aa16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 ATP2B1P20020 1258 aa16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 SARSP49591 514 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 GPC3P51654 580 aa16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 DRP2Q13474 957 aa16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 TMEM266Q2M3C6 531 aa16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 TTC38Q5R3I4 469 aa16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 EIF2AK1Q9BQI3 630 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 JPH2Q9BR39 696 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 DHX33Q9H6R0 707 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 C1orf112Q9NSG2 853 aa16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 ST3GAL5Q9UNP4 418 aa16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 AKT3Q9Y243 479 aa16.98■□□□□ 0.31
SNRPA1-210ENST00000560383 GRM6O15303 877 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 GJB2P29033 226 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 DNM2P50570 870 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 TOB1P50616 345 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 NPEPPSP55786 919 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 NFX1Q12986 1120 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 CUL4AQ13619 759 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 GNL2Q13823 731 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 CTTNQ14247 550 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 PLA2G4FQ68DD2 849 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 OTUD6AQ7L8S5 288 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 FAM228AQ86W67 206 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 EXOC8Q8IYI6 725 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 C4orf32Q8N8J7 132 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 SH2D3AQ9BRG2 576 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 RGS18Q9NS28 235 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 FAM50BQ9Y247 325 aa16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 MRPL42Q9Y6G3 142 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-210ENST00000560383 GRXCR2A6NFK2 248 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 OR52Z1P0C646 297 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 DARSP14868 501 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 COL9A1P20849 921 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 RFC5P40937 340 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 CYP4A11Q02928 519 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 ZNF174Q15697 407 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 CTC1Q2NKJ3 1217 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 PTCRAQ6ISU1 281 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms