RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 CBX8Q9HC52 389 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 CYP26B1Q9NR63 512 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 WRAP73Q9P2S5 460 aaPredicted RBP7.12□□□□□ -1.27
SPG11-221ENST00000560299 GNEQ9Y223 722 aaKnown RBP7.12□□□□□ -1.27
SPG11-221ENST00000560299 MKI67P46013 3256 aaKnown RBP7.12□□□□□ -1.27
SPG11-221ENST00000560299 KAT6AQ92794 2004 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 TNRC18O15417 2968 aaPredicted RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 MYH11P35749 1972 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 FSD2A1L4K1 749 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 FRMD3A2A2Y4 597 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 A6NJR5 290 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 H0YCG3 227 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 IKBKBO14920 756 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 ZBTB39O15060 712 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 ZNF862O60290 1169 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 USO1O60763 962 aaKnown RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 HIP1RO75146 1068 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 ADAMTS4O75173 837 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 FGFR1OPO95684 399 aaKnown RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 LGALS2P05162 132 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 MAPTP10636 758 aaKnown RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 HOXD8P13378 290 aaPredicted RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 DNM2P50570 870 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 POLGP54098 1239 aaPredicted RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 MYL5Q02045 173 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 MLLT1Q03111 559 aaPredicted RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 RAD51AP2Q09MP3 1159 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 TBC1D8BQ0IIM8 1120 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 COASYQ13057 564 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 PAK1Q13153 545 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 ALCAMQ13740 583 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 PPP2R5AQ15172 486 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 MTERF2Q49AM1 385 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 ZNF484Q5JVG2 852 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 ODR4Q5SWX8 454 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 RNF180Q86T96 592 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 FAM178BQ8IXR5 827 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 MYOCDQ8IZQ8 938 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 GUF1Q8N442 669 aaKnown RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 PCSK9Q8NBP7 692 aaKnown RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 RETREG2Q8NC44 543 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 TRPV1Q8NER1 839 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 ENOX1Q8TC92 643 aaKnown RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 ATP8B4Q8TF62 1192 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 TCP11Q8WWU5 503 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 IFT74Q96LB3 600 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 TOX2Q96NM4 488 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 DEFB118Q96PH6 123 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 TSG101Q99816 390 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 REEP2Q9BRK0 252 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 HTATIP2Q9BUP3 242 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 RUSC1Q9BVN2 902 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 KATNAL1Q9BW62 490 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 RBSNQ9H1K0 784 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 MRPL44Q9H9J2 332 aaKnown RBP7.11□□□□□ -1.27
SPG11-221ENST00000560299 ATP6V0A4Q9HBG4 840 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 SLC39A2Q9NP94 309 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 OLFML3Q9NRN5 406 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 PHF24Q9UPV7 400 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 CEP290O15078 2479 aa7.11□□□□□ -1.27
SPG11-221ENST00000560299 COL1A2P08123 1366 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 NPHP3-ACAD11A0A0J9YXS1 232 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 RRN3P2A6NIE6 340 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 H3BRB1 525 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 EIF3DO15371 548 aaKnown RBP eCLIP7.1□□□□□ -1.27
SPG11-221ENST00000560299 MAGEB2O15479 319 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 STBD1O95210 358 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 MMP3P08254 477 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 C6orf222P0C671 652 aaPredicted RBP7.1□□□□□ -1.27
SPG11-221ENST00000560299 GNAT1P11488 350 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 PLS3P13797 630 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 CDK11BP21127 795 aaKnown RBP7.1□□□□□ -1.27
SPG11-221ENST00000560299 BMP6P22004 513 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 TMOD1P28289 359 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 PRCPP42785 496 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 ZNF131P52739 623 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 NPEPPSP55786 919 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 RTP1P59025 263 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 PLCB2Q00722 1185 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 STK4Q13043 487 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 DMP1Q13316 513 aaPredicted RBP7.1□□□□□ -1.27
SPG11-221ENST00000560299 PLCB4Q15147 1175 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 FSCN1Q16658 493 aaKnown RBP7.1□□□□□ -1.27
SPG11-221ENST00000560299 GJC2Q5T442 439 aaPredicted RBP7.1□□□□□ -1.27
SPG11-221ENST00000560299 FAM102BQ5T8I3 360 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 PLA2G4FQ68DD2 849 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 KLHL10Q6JEL2 608 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 C11orf57Q6ZUT1 292 aaPredicted RBP7.1□□□□□ -1.27
SPG11-221ENST00000560299 MAEAQ7L5Y9 396 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 SFR1Q86XK3 245 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 ADSSL1Q8N142 457 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 AOPEPQ8N6M6 819 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 ANKRD20A12PQ8NF67 263 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 NELFBQ8WX92 580 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 PCYT2Q99447 389 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 TUT1Q9H6E5 874 aaKnown RBP7.1□□□□□ -1.27
SPG11-221ENST00000560299 RWDD2AQ9UIY3 292 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 EXOC7Q9UPT5 735 aa7.1□□□□□ -1.27
SPG11-221ENST00000560299 GDAQ9Y2T3 454 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms