RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PPP1R16BQ96T49 567 aa18.74■□□□□ 0.59
RPL28-209ENST00000560055 MTRQ99707 1265 aa18.74■□□□□ 0.59
RPL28-209ENST00000560055 NT5C3AQ9H0P0 336 aa18.74■□□□□ 0.59
RPL28-209ENST00000560055 ATP6V0A4Q9HBG4 840 aa18.74■□□□□ 0.59
RPL28-209ENST00000560055 BMP2KQ9NSY1 1161 aaPredicted RBP18.74■□□□□ 0.59
RPL28-209ENST00000560055 GINS2Q9Y248 185 aa18.74■□□□□ 0.59
RPL28-209ENST00000560055 SPTLC2O15270 562 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 EYA4O95677 639 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 CD52P31358 61 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 UBA7P41226 1012 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 WDR5P61964 334 aaKnown RBP18.73■□□□□ 0.59
RPL28-209ENST00000560055 DNM1Q05193 864 aaKnown RBP18.73■□□□□ 0.59
RPL28-209ENST00000560055 IKBKEQ14164 716 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 STK38Q15208 465 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 PADI6Q6TGC4 694 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 ZNF410Q86VK4 478 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 TCP11Q8WWU5 503 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 PRPF31Q8WWY3 499 aaKnown RBP18.73■□□□□ 0.59
RPL28-209ENST00000560055 PSPC1Q8WXF1 523 aaKnown RBP18.73■□□□□ 0.59
RPL28-209ENST00000560055 CCSER1Q9C0I3 900 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 BHMT2Q9H2M3 363 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 MTMR10Q9NXD2 777 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 DNM3Q9UQ16 869 aa18.73■□□□□ 0.59
RPL28-209ENST00000560055 ARHGEF35A5YM69 484 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 E9PMD0 336 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 USO1O60763 962 aaKnown RBP18.72■□□□□ 0.59
RPL28-209ENST00000560055 EFCAB14O75071 495 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 ARL2P36404 184 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 FAM109BQ6ICB4 259 aaPredicted RBP18.72■□□□□ 0.59
RPL28-209ENST00000560055 USP49Q70CQ1 688 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 FAM228AQ86W67 206 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 RHPN2Q8IUC4 686 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 KSR1Q8IVT5 923 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 MCPH1Q8NEM0 835 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 LRRC15Q8TF66 581 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 ERVK-5Q9HDB9 667 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 DAXXQ9UER7 740 aaPredicted RBP18.72■□□□□ 0.59
RPL28-209ENST00000560055 PADI3Q9ULW8 664 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 NOC2LQ9Y3T9 749 aaKnown RBP18.72■□□□□ 0.59
RPL28-209ENST00000560055 COL4A3BPQ9Y5P4 624 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 SLC4A7Q9Y6M7 1214 aa18.72■□□□□ 0.59
RPL28-209ENST00000560055 LOXHD1Q8IVV2 1947 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 ZBBXA8MT70 800 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 RPS6KA5O75582 802 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 DARSP14868 501 aaKnown RBP18.71■□□□□ 0.59
RPL28-209ENST00000560055 CYP11B2P19099 503 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 EIF4BP23588 611 aaKnown RBP18.71■□□□□ 0.59
RPL28-209ENST00000560055 LAMTOR4Q0VGL1 99 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 PAK2Q13177 524 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 SPECC1Q5M775 1068 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 FAM43BQ6ZT52 329 aaPredicted RBP18.71■□□□□ 0.59
RPL28-209ENST00000560055 NLRP7Q8WX94 980 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 SYMPKQ92797 1274 aaKnown RBP18.71■□□□□ 0.59
RPL28-209ENST00000560055 EPSTI1Q96J88 318 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 ZNF668Q96K58 619 aaPredicted RBP18.71■□□□□ 0.59
RPL28-209ENST00000560055 FAM161BQ96MY7 647 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 TMX1Q9H3N1 280 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 IFT122Q9HBG6 1241 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 CFAP45Q9UL16 551 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 ST3GAL5Q9UNP4 418 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 CHD7Q9P2D1 2997 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 MICAL3Q7RTP6 2002 aa18.71■□□□□ 0.59
RPL28-209ENST00000560055 CHD9Q3L8U1 2897 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 A0A087WZ62 844 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.7■□□□□ 0.58
RPL28-209ENST00000560055 ASAP2O43150 1006 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 ANP32AP39687 249 aaKnown RBP18.7■□□□□ 0.58
RPL28-209ENST00000560055 SLC12A3P55017 1021 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 NUCB2P80303 420 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 DEFB103AP81534 67 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 SMAD3P84022 425 aaKnown RBP18.7■□□□□ 0.58
RPL28-209ENST00000560055 MXD4Q14582 209 aaPredicted RBP18.7■□□□□ 0.58
RPL28-209ENST00000560055 KARSQ15046 597 aaKnown RBP18.7■□□□□ 0.58
RPL28-209ENST00000560055 ZRSR1Q15695 479 aaKnown RBP18.7■□□□□ 0.58
RPL28-209ENST00000560055 PHOSPHO2Q8TCD6 241 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 KCNG4Q8TDN1 519 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 ASAP3Q8TDY4 903 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 LINC01599Q8WXQ3 324 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 CALML4Q96GE6 196 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 CDK5RAP3Q96JB5 506 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 CHAMP1Q96JM3 812 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 NLRP4Q96MN2 994 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 SLC9A7Q96T83 725 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 PLIN2Q99541 437 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 FDXACB1Q9BRP7 624 aaPredicted RBP18.7■□□□□ 0.58
RPL28-209ENST00000560055 GPRC5CQ9NQ84 441 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 RCOR1Q9UKL0 485 aa18.7■□□□□ 0.58
RPL28-209ENST00000560055 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.69■□□□□ 0.58
RPL28-209ENST00000560055 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.69■□□□□ 0.58
RPL28-209ENST00000560055 GPR182O15218 404 aa18.69■□□□□ 0.58
RPL28-209ENST00000560055 ATP2A2P16615 1042 aaKnown RBP18.69■□□□□ 0.58
RPL28-209ENST00000560055 PLCG1P19174 1290 aa18.69■□□□□ 0.58
RPL28-209ENST00000560055 GLRA2P23416 452 aa18.69■□□□□ 0.58
RPL28-209ENST00000560055 POU5F1BQ06416 359 aa18.69■□□□□ 0.58
RPL28-209ENST00000560055 AXDND1Q5T1B0 1012 aaPredicted RBP18.69■□□□□ 0.58
RPL28-209ENST00000560055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.69■□□□□ 0.58
RPL28-209ENST00000560055 SYT2Q8N9I0 419 aaPredicted RBP18.69■□□□□ 0.58
RPL28-209ENST00000560055 FTHL17Q9BXU8 183 aa18.69■□□□□ 0.58
RPL28-209ENST00000560055 GCOM2Q9BZD3 368 aaPredicted RBP18.69■□□□□ 0.58
RPL28-209ENST00000560055 POLR3FQ9H1D9 316 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms