RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 NIFKQ9BYG3 293 aaKnown RBP14.12□□□□□ -0.15
SNX1-209ENST00000559961 TLR9Q9NR96 1032 aa14.12□□□□□ -0.15
SNX1-209ENST00000559961 CHST12Q9NRB3 414 aa14.12□□□□□ -0.15
SNX1-209ENST00000559961 TYW1Q9NV66 732 aaKnown RBP14.12□□□□□ -0.15
SNX1-209ENST00000559961 KCNJ14Q9UNX9 436 aa14.12□□□□□ -0.15
SNX1-209ENST00000559961 SIP14410 1827 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 PI4K2BG5E9Z4 385 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 RBAK-RBAKDNI3L0D1 243 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 PFKFB2O60825 505 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 FGF18O76093 207 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 DARSP14868 501 aaKnown RBP14.11□□□□□ -0.15
SNX1-209ENST00000559961 QARSP47897 775 aaKnown RBP14.11□□□□□ -0.15
SNX1-209ENST00000559961 NRIP1P48552 1158 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 GATMP50440 423 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 GPC3P51654 580 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 ADAM15Q13444 863 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 SMAD4Q13485 552 aaKnown RBP14.11□□□□□ -0.15
SNX1-209ENST00000559961 RBM23Q86U06 439 aaKnown RBP14.11□□□□□ -0.15
SNX1-209ENST00000559961 ADHFE1Q8IWW8 467 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 SLFN12Q8IYM2 578 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 RSPH1Q8WYR4 309 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 FAM122AQ96E09 287 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 CCDC43Q96MW1 224 aaKnown RBP14.11□□□□□ -0.15
SNX1-209ENST00000559961 ZNF558Q96NG5 402 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 CDCA3Q99618 268 aaPredicted RBP14.11□□□□□ -0.15
SNX1-209ENST00000559961 MRPL9Q9BYD2 267 aaKnown RBP14.11□□□□□ -0.15
SNX1-209ENST00000559961 ADAMTS10Q9H324 1103 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 ENTPD7Q9NQZ7 604 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 SUCLA2Q9P2R7 463 aaPredicted RBP14.11□□□□□ -0.15
SNX1-209ENST00000559961 ORC3Q9UBD5 711 aaPredicted RBP14.11□□□□□ -0.15
SNX1-209ENST00000559961 PPME1Q9Y570 386 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 PTPRSQ13332 1948 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 STK36Q9NRP7 1315 aa14.11□□□□□ -0.15
SNX1-209ENST00000559961 TBX3O15119 743 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 ZNF862O60290 1169 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 GPR37L1O60883 481 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 P4HBP07237 508 aaKnown RBP14.1□□□□□ -0.15
SNX1-209ENST00000559961 FGFR1P11362 822 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 CA8P35219 290 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 ALDH7A1P49419 539 aaKnown RBP14.1□□□□□ -0.15
SNX1-209ENST00000559961 POLGP54098 1239 aaPredicted RBP14.1□□□□□ -0.15
SNX1-209ENST00000559961 NCBP1Q09161 790 aaKnown RBP14.1□□□□□ -0.15
SNX1-209ENST00000559961 SCRN1Q12765 414 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 COL19A1Q14993 1142 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 CTC1Q2NKJ3 1217 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 TWF2Q6IBS0 349 aaKnown RBP14.1□□□□□ -0.15
SNX1-209ENST00000559961 PPP4R3AQ6IN85 833 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 PIK3AP1Q6ZUJ8 805 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 ZNF410Q86VK4 478 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 RHPN2Q8IUC4 686 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 EFHBQ8N7U6 833 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 COLGALT1Q8NBJ5 622 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 GJA10Q969M2 543 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 ZNF668Q96K58 619 aaPredicted RBP14.1□□□□□ -0.15
SNX1-209ENST00000559961 LRFN3Q9BTN0 628 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 PHF20Q9BVI0 1012 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 NGRNQ9NPE2 291 aaKnown RBP14.1□□□□□ -0.15
SNX1-209ENST00000559961 LZTS1Q9Y250 596 aa14.1□□□□□ -0.15
SNX1-209ENST00000559961 COL4A4P53420 1690 aaPredicted RBP14.1□□□□□ -0.15
SNX1-209ENST00000559961 A0A0U1RQF3 1178 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 DCXO43602 365 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 MAFO75444 373 aaPredicted RBP14.09□□□□□ -0.15
SNX1-209ENST00000559961 LINC00271P0C7V0 271 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 KRT2P35908 639 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 DSC3Q14574 896 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 SMAD2Q15796 467 aaKnown RBP14.09□□□□□ -0.15
SNX1-209ENST00000559961 UGCGQ16739 394 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 CATSPER4Q7RTX7 472 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 ECHDC2Q86YB7 292 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 ETNPPLQ8TBG4 499 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 TCP11Q8WWU5 503 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 PGBD4Q96DM1 585 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 CEP170P1Q96L14 293 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 MBOAT7Q96N66 472 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 AIFM3Q96NN9 605 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 SPG21Q9NZD8 308 aa14.09□□□□□ -0.15
SNX1-209ENST00000559961 TCF20Q9UGU0 1960 aaKnown RBP14.09□□□□□ -0.15
SNX1-209ENST00000559961 MBTPS2O43462 519 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 LTBRP36941 435 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 RFC5P40937 340 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 RAB27AP51159 221 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 PLCB3Q01970 1234 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 RNASELQ05823 741 aaKnown RBP14.08□□□□□ -0.16
SNX1-209ENST00000559961 PPP2R5CQ13362 524 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 SAFBQ15424 915 aaKnown RBP eCLIP14.08□□□□□ -0.16
SNX1-209ENST00000559961 TARBP2Q15633 366 aaKnown RBP14.08□□□□□ -0.16
SNX1-209ENST00000559961 NCAPH2Q6IBW4 605 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 KCNT2Q6UVM3 1135 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 GLB1LQ6UWU2 654 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 TMC7Q7Z402 723 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 LINC01465Q8N7H1 131 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 MRPS27Q92552 414 aaKnown RBP14.08□□□□□ -0.16
SNX1-209ENST00000559961 NLRP4Q96MN2 994 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 CYP26B1Q9NR63 512 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 TPCN1Q9ULQ1 816 aa14.08□□□□□ -0.16
SNX1-209ENST00000559961 PIN4Q9Y237 131 aaKnown RBP14.08□□□□□ -0.16
SNX1-209ENST00000559961 TTC3P53804 2025 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 A0A087WZ62 844 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 M0R2N6 131 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 ASAP2O43150 1006 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms