RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 ENPP3O14638 875 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 ASAP2O43150 1006 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 GJB5O95377 273 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 RABGGTBP53611 331 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 BECN1Q14457 450 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 ZNF410Q86VK4 478 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 DEFB123Q8N688 67 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 PRPF31Q8WWY3 499 aaKnown RBP15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 PSPC1Q8WXF1 523 aaKnown RBP15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 TIFAQ96CG3 184 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 AK8Q96MA6 479 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 ZBED2Q9BTP6 218 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 GCOM2Q9BZD3 368 aaPredicted RBP15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 GBF1Q92538 1859 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 PP2D1A8MPX8 630 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 ECM1Q16610 540 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 ZNF697Q5TEC3 545 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 KCTD17Q8N5Z5 321 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 TOP1MTQ969P6 601 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 TMEM143Q96AN5 459 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 ZNF668Q96K58 619 aaPredicted RBP15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 INO80BQ9C086 356 aaPredicted RBP15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 SLC28A3Q9HAS3 691 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 ATP6V0A4Q9HBG4 840 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 BMP2KQ9NSY1 1161 aaPredicted RBP15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 ST3GAL5Q9UNP4 418 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 COL4A3BPQ9Y5P4 624 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 CLIC4Q9Y696 253 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 PTPRSQ13332 1948 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 CHD9Q3L8U1 2897 aa15.22■□□□□ 0.03
CHRNB4-204ENST00000559849 A0A087WZ62 844 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 TLL1O43897 1013 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 ZSCAN22P10073 491 aaPredicted RBP15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 DARSP14868 501 aaKnown RBP15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 MXD4Q14582 209 aaPredicted RBP15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 TMCO2Q7Z6W1 182 aaPredicted RBP15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 FDXACB1Q9BRP7 624 aaPredicted RBP15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 ERVK-5Q9HDB9 667 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 XPNPEP1Q9NQW7 623 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 DDX19AQ9NUU7 478 aaKnown RBP15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 DNM3Q9UQ16 869 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 TTC3P53804 2025 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 LAMTOR4Q0VGL1 99 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 PTPAQ15257 358 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 RTN4RL1Q86UN2 441 aaPredicted RBP15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 FAM228AQ86W67 206 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 KSR1Q8IVT5 923 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 NLRP4Q96MN2 994 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 RAD9AQ99638 391 aa15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 MMTAG2Q9BU76 263 aaKnown RBP15.21■□□□□ 0.03
CHRNB4-204ENST00000559849 ARHGEF35A5YM69 484 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 LONP1P36776 959 aaKnown RBP15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 CEBPZQ03701 1054 aaKnown RBP15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 Q7L0L9 218 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 NT5C3AQ9H0P0 336 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 BHMT2Q9H2M3 363 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 TMX1Q9H3N1 280 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 ZNF576Q9H609 170 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 YBX2Q9Y2T7 364 aaKnown RBP15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 USO1O60763 962 aaKnown RBP15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 UPP2O95045 317 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 SRGAP2CP0DJJ0 459 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 MYOGP15173 224 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 UBA7P41226 1012 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 HYIQ5T013 277 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 FAM117BQ6P1L5 589 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 MCPH1Q8NEM0 835 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 ZNF396Q96N95 335 aaPredicted RBP15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 USP28Q96RU2 1077 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 NKX2-4Q9H2Z4 354 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 TTYH1Q9H313 450 aaPredicted RBP15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 IFT122Q9HBG6 1241 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 INSL6Q9Y581 213 aa15.2■□□□□ 0.02
CHRNB4-204ENST00000559849 DENND3A2RUS2 1198 aa15.19■□□□□ 0.02
CHRNB4-204ENST00000559849 F13A1P00488 732 aa15.19■□□□□ 0.02
CHRNB4-204ENST00000559849 ZSCAN20P17040 1043 aaPredicted RBP15.19■□□□□ 0.02
CHRNB4-204ENST00000559849 SLC39A14Q15043 492 aa15.19■□□□□ 0.02
CHRNB4-204ENST00000559849 ZRSR1Q15695 479 aaKnown RBP15.19■□□□□ 0.02
CHRNB4-204ENST00000559849 FOXD4L5Q5VV16 416 aaPredicted RBP15.19■□□□□ 0.02
CHRNB4-204ENST00000559849 PADI6Q6TGC4 694 aa15.19■□□□□ 0.02
CHRNB4-204ENST00000559849 FOXD4L4Q8WXT5 416 aaPredicted RBP15.19■□□□□ 0.02
CHRNB4-204ENST00000559849 FAM161BQ96MY7 647 aa15.19■□□□□ 0.02
CHRNB4-204ENST00000559849 SRPRBQ9Y5M8 271 aaKnown RBP15.19■□□□□ 0.02
CHRNB4-204ENST00000559849 E9PMD0 336 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 SLC26A4O43511 780 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 CSDE1O75534 798 aaKnown RBP15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 EYA4O95677 639 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 CA3P07451 260 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 CYP11B2P19099 503 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 SFPQP23246 707 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 MARCKSP29966 332 aaPredicted RBP15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 ARL2P36404 184 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 POU5F1BQ06416 359 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 CABP7Q86V35 215 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 RNF149Q8NC42 400 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 LINC01599Q8WXQ3 324 aa15.18■□□□□ 0.02
CHRNB4-204ENST00000559849 CDK5RAP3Q96JB5 506 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms