RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TNNC1P63316 161 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 SLC15A2Q16348 729 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 GRIPAP1Q4V328 841 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 PEX26Q7Z412 305 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 DAW1Q8N136 415 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 IL31RAQ8NI17 732 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 NACC1Q96RE7 527 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 TEKT3Q9BXF9 490 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 INTS2Q9H0H0 1204 aaKnown RBP10.94□□□□□ -0.66
LRRC28-216ENST00000559819 DDX47Q9H0S4 455 aaKnown RBP10.94□□□□□ -0.66
LRRC28-216ENST00000559819 PCIF1Q9H4Z3 704 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 FBXL5Q9UKA1 691 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 STXBP5LQ9Y2K9 1186 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 RBBP6Q7Z6E9 1792 aaKnown RBP10.94□□□□□ -0.66
LRRC28-216ENST00000559819 GTPBP10A4D1E9 387 aaKnown RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 ZNF233A6NK53 670 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 MYO1CO00159 1063 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 TULP1O00294 542 aaPredicted RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 OPA1O60313 960 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 PDE4CQ08493 712 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 DGKZQ13574 1117 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 TBC1D10BQ4KMP7 808 aaPredicted RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 CFAP58Q5T655 872 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 ALS2CLQ60I27 953 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 RSBN1LQ6PCB5 846 aaPredicted RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 TRMT1LQ7Z2T5 733 aaKnown RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 DAAM2Q86T65 1068 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 PALB2Q86YC2 1186 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 C10orf67Q8IYJ2 551 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 FAM151AQ8WW52 585 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 NEUROG2Q9H2A3 272 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 VCPKMTQ9H867 229 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 TAS2R14Q9NYV8 317 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 COL20A1Q9P218 1284 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 MRPL11Q9Y3B7 192 aaKnown RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 KIF13BQ9NQT8 1826 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 ARHGEF35A5YM69 484 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 SHOX2O60902 331 aaPredicted RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 ITGB5P18084 799 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 ATP1A2P50993 1020 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 IRAK1P51617 712 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 ZNF131P52739 623 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 DLG4P78352 724 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 MAPK7Q13164 816 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 NNTQ13423 1086 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 DLGAP5Q15398 846 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 HS2ST1Q7LGA3 356 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 VPS36Q86VN1 386 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 ZSWIM2Q8NEG5 633 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 SLC30A5Q8TAD4 765 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 SCFD2Q8WU76 684 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 CHURC1Q8WUH1 139 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 ARHGEF26Q96DR7 871 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 HOOK2Q96ED9 719 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 PBKQ96KB5 322 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 STK33Q9BYT3 514 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 SEPT11Q9NVA2 429 aaKnown RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 DMAC2Q9NW81 257 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 FEZ2Q9UHY8 353 aaPredicted RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 FRMD4BQ9Y2L6 1034 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 COL2A1P02458 1487 aaPredicted RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 TMEM150BA6NC51 233 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 K7ENM7 598 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 IPO5O00410 1097 aaKnown RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 PPP1R12BO60237 982 aaPredicted RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 EXOC3O60645 756 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 ECHS1P30084 290 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 INPP5BP32019 993 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 GNGT1P63211 74 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 MYL7Q01449 175 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 PPARDQ03181 441 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 PPFIA1Q13136 1202 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 HLTFQ14527 1009 aaKnown RBP eCLIP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 IFI16Q16666 785 aaKnown RBP10.93□□□□□ -0.66
LRRC28-216ENST00000559819 B3GNT9Q6UX72 402 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 NT5DC3Q86UY8 548 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 SYCP3Q8IZU3 236 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 IQCKQ8N0W5 287 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 CAPS2Q9BXY5 557 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 WDR11Q9BZH6 1224 aa10.93□□□□□ -0.66
LRRC28-216ENST00000559819 GRIN2DO15399 1336 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 PGRMC1O00264 195 aaKnown RBP10.92□□□□□ -0.66
LRRC28-216ENST00000559819 NFIBO00712 420 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 PPFIA4O75335 1185 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 NAA35Q5VZE5 725 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 PHLDB3Q6NSJ2 640 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 SLFN11Q7Z7L1 901 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 ACTRT1Q8TDG2 376 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 MXRA8Q9BRK3 442 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 ZNF277Q9NRM2 450 aaPredicted RBP10.92□□□□□ -0.66
LRRC28-216ENST00000559819 KRIT1O00522 736 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 CES2O00748 559 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 BUB1BO60566 1050 aaPredicted RBP10.92□□□□□ -0.66
LRRC28-216ENST00000559819 PDCLQ13371 301 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 NFIL3Q16649 462 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 MIER3Q7Z3K6 550 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 SLC35G2Q8TBE7 412 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 SLC20A1Q8WUM9 679 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms