RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 RPLP2P05387 115 aaKnown RBP10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 KLRC1P26715 233 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 GBP2P32456 591 aaPredicted RBP10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 TBC1D8BQ0IIM8 1120 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 COL9A2Q14055 689 aaPredicted RBP10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 KIAA0319Q5VV43 1072 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 MTHFD1LQ6UB35 978 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 OTOP3Q7RTS5 596 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 TRMT1LQ7Z2T5 733 aaKnown RBP10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 FAM228AQ86W67 206 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 VPS52Q8N1B4 723 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 SLC39A11Q8N1S5 342 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 SUMF1Q8NBK3 374 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 RILPL2Q969X0 211 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 RNF19AQ9NV58 838 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 CDV3Q9UKY7 258 aaKnown RBP10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 COL4A3Q01955 1670 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 FANCMQ8IYD8 2048 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 EVPLQ92817 2033 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 PNMA6FA0A0J9YX94 578 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 SMIM35A0A1B0GVV1 85 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 GPR182O15218 404 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 KINO60870 393 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 VTNP04004 478 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 ITGB5P18084 799 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 BCAR1P56945 870 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 TRAF1Q13077 416 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 MTMR1Q13613 665 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 BMS1Q14692 1282 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 CLLU1OSQ5K130 101 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 VARS2Q5ST30 1063 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 C1orf210Q8IVY1 113 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 NME8Q8N427 588 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 HELQQ8TDG4 1101 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 GPRASP2Q96D09 838 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 ZNF668Q96K58 619 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 FOXQ1Q9C009 403 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 RIOX1Q9H6W3 641 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 USP18Q9UMW8 372 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 SIT1Q9Y3P8 196 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 KDM3AQ9Y4C1 1321 aa10.25□□□□□ -0.77
SNRPA1-208ENST00000559686 DDX39AO00148 427 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 SSBP05455 408 aaKnown RBP eCLIP10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 STAT5BP51692 787 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 GRM4Q14833 912 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 UBE2SQ16763 222 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 LONRF3Q496Y0 759 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 ODR4Q5SWX8 454 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 ANKRD45Q5TZF3 282 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 TMEM92Q6UXU6 159 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 CYB5R4Q7L1T6 521 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 GPR149Q86SP6 731 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 TMEM173Q86WV6 379 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 KIAA0319LQ8IZA0 1049 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 GPR152Q8TDT2 470 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 SLC22A17Q8WUG5 538 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 TMEM169Q96HH4 297 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 CDHR1Q96JP9 859 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 ZBP1Q9H171 429 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 SFXN1Q9H9B4 322 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 SENP2Q9HC62 589 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 JPH1Q9HDC5 661 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 WNT16Q9UBV4 365 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 SLC9A2Q9UBY0 812 aa10.24□□□□□ -0.77
SNRPA1-208ENST00000559686 CACNA1GO43497 2377 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 HOXA2O43364 376 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 N4BP1O75113 896 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 ZC3H11AO75152 810 aaKnown RBP eCLIP10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 ALDH7A1P49419 539 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 MFAP1P55081 439 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 ACTR2P61160 394 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 FAM189BP81408 668 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 COL9A3Q14050 684 aaPredicted RBP10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 DSC3Q14574 896 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 SEC23AQ15436 765 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 IMMTQ16891 758 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 LETM2Q2VYF4 491 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 ECHDC2Q86YB7 292 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 TNPO1Q92973 898 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 KRT23Q9C075 422 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 GBP3Q9H0R5 595 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 ELAC1Q9H777 363 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 SPATA6Q9NWH7 488 aaPredicted RBP10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 SALL3Q9BXA9 1300 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 MIA3Q5JRA6 1907 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 CEP250Q9BV73 2442 aa10.23□□□□□ -0.77
SNRPA1-208ENST00000559686 MAP1BP46821 2468 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 MEIS2O14770 477 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 BACH1O14867 736 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 GLULP15104 373 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 ZSCAN20P17040 1043 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 SDHBP21912 280 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 FGFR4P22455 802 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 KLRC2P26717 231 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 CRYBB1P53674 252 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 PDE1AP54750 535 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 PTPN14Q15678 1187 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 DCLRE1AQ6PJP8 1040 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 CWC27Q6UX04 472 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 MAML2Q8IZL2 1156 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms