RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 GCOM2Q9BZD3 368 aaPredicted RBP9.16□□□□□ -0.94
SNX1-207ENST00000559401 TMEM60Q9H2L4 133 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 TMX1Q9H3N1 280 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 PRDM6Q9NQX0 595 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 C1orf112Q9NSG2 853 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 RNF216Q9NWF9 866 aaPredicted RBP9.16□□□□□ -0.94
SNX1-207ENST00000559401 SUCLA2Q9P2R7 463 aaPredicted RBP9.16□□□□□ -0.94
SNX1-207ENST00000559401 WRAP73Q9P2S5 460 aaPredicted RBP9.16□□□□□ -0.94
SNX1-207ENST00000559401 THEGQ9P2T0 379 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 SMC3Q9UQE7 1217 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 PCDHB7Q9Y5E2 793 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 MTCH2Q9Y6C9 303 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 LAMA2P24043 3122 aaKnown RBP9.16□□□□□ -0.94
SNX1-207ENST00000559401 MAFO75444 373 aaPredicted RBP9.15□□□□□ -0.94
SNX1-207ENST00000559401 CSDE1O75534 798 aaKnown RBP9.15□□□□□ -0.94
SNX1-207ENST00000559401 DGKIO75912 1065 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 CSPG5O95196 566 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 DARSP14868 501 aaKnown RBP9.15□□□□□ -0.94
SNX1-207ENST00000559401 SFPQP23246 707 aaKnown RBP eCLIP9.15□□□□□ -0.94
SNX1-207ENST00000559401 EIF4BP23588 611 aaKnown RBP9.15□□□□□ -0.94
SNX1-207ENST00000559401 TECP42680 631 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 GPM6BQ13491 265 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 NBR1Q14596 966 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 EMC2Q15006 297 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 SLC24A5Q71RS6 500 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 KSR1Q8IVT5 923 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 TMEM192Q8IY95 271 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 EXOC8Q8IYI6 725 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 ZNF710Q8N1W2 664 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 ZNF579Q8NAF0 562 aaKnown RBP9.15□□□□□ -0.94
SNX1-207ENST00000559401 PSPC1Q8WXF1 523 aaKnown RBP9.15□□□□□ -0.94
SNX1-207ENST00000559401 TMEM143Q96AN5 459 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 MTMR9Q96QG7 549 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 MTRQ99707 1265 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 ADAMTS10Q9H324 1103 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 RGS18Q9NS28 235 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 RWDD3Q9Y3V2 267 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.15□□□□□ -0.94
SNX1-207ENST00000559401 COL4A3BPQ9Y5P4 624 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 GTF3C3Q9Y5Q9 886 aa9.15□□□□□ -0.94
SNX1-207ENST00000559401 FNDC1Q4ZHG4 1894 aaPredicted RBP9.15□□□□□ -0.95
SNX1-207ENST00000559401 PRRC2BQ5JSZ5 2229 aaKnown RBP9.15□□□□□ -0.95
SNX1-207ENST00000559401 CHD9Q3L8U1 2897 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 IGKV6-21A0A0C4DH24 114 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 TBKBP1A7MCY6 615 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 ZBTB39O15060 712 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 LPXNO60711 386 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 SLITRK3O94933 977 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 TRAPPC10P48553 1259 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 GATMP50440 423 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 CDC42EP1Q00587 391 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 ORC2Q13416 577 aaPredicted RBP9.14□□□□□ -0.95
SNX1-207ENST00000559401 PTPROQ16827 1216 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 CATSPER4Q7RTX7 472 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 ZNF410Q86VK4 478 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 CMTR2Q8IYT2 770 aaKnown RBP9.14□□□□□ -0.95
SNX1-207ENST00000559401 ABI1Q8IZP0 508 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 PIGOQ8TEQ8 1089 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 TCP11Q8WWU5 503 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 CEP89Q96ST8 783 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 C11orf84Q9BUA3 381 aaPredicted RBP9.14□□□□□ -0.95
SNX1-207ENST00000559401 BACH2Q9BYV9 841 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 INO80BQ9C086 356 aaPredicted RBP9.14□□□□□ -0.95
SNX1-207ENST00000559401 RC3H2Q9HBD1 1191 aaKnown RBP9.14□□□□□ -0.95
SNX1-207ENST00000559401 ATP6V0A4Q9HBG4 840 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 PIN4Q9Y237 131 aaKnown RBP9.14□□□□□ -0.95
SNX1-207ENST00000559401 PPME1Q9Y570 386 aa9.14□□□□□ -0.95
SNX1-207ENST00000559401 MRPL42Q9Y6G3 142 aaKnown RBP9.14□□□□□ -0.95
SNX1-207ENST00000559401 A0A087WWV3 80 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 C9IYK1 514 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 DLL1O00548 723 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 GAS2O43903 313 aaKnown RBP9.13□□□□□ -0.95
SNX1-207ENST00000559401 USO1O60763 962 aaKnown RBP9.13□□□□□ -0.95
SNX1-207ENST00000559401 SRGAP2CP0DJJ0 459 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 FGFR1P11362 822 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 POU3F3P20264 500 aaPredicted RBP9.13□□□□□ -0.95
SNX1-207ENST00000559401 U2AF2P26368 475 aaKnown RBP eCLIP9.13□□□□□ -0.95
SNX1-207ENST00000559401 BMPR1AP36894 532 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 PHKA2P46019 1235 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 LAMTOR4Q0VGL1 99 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 DSC3Q14574 896 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 FAM102BQ5T8I3 360 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 HAUS3Q68CZ6 603 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 TWF2Q6IBS0 349 aaKnown RBP9.13□□□□□ -0.95
SNX1-207ENST00000559401 POTEGQ6S5H5 508 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 FAM43BQ6ZT52 329 aaPredicted RBP9.13□□□□□ -0.95
SNX1-207ENST00000559401 EP400NLQ6ZTU2 488 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 PRPF31Q8WWY3 499 aaKnown RBP9.13□□□□□ -0.95
SNX1-207ENST00000559401 ZNF689Q96CS4 500 aaPredicted RBP9.13□□□□□ -0.95
SNX1-207ENST00000559401 HSD17B14Q9BPX1 270 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 RAB34Q9BZG1 259 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 DHX33Q9H6R0 707 aaKnown RBP9.13□□□□□ -0.95
SNX1-207ENST00000559401 ANKEF1Q9NU02 776 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 TMEM161AQ9NX61 479 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 DACT1Q9NYF0 836 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 LMCD1Q9NZU5 365 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 LRWD1Q9UFC0 647 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 PCDHB6Q9Y5E3 794 aa9.13□□□□□ -0.95
SNX1-207ENST00000559401 ATG2AQ2TAZ0 1938 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 VPS37CA5D8V6 355 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms