RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 NT5DC1Q5TFE4 455 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 EFCAB12Q6NXP0 572 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 TRMT1LQ7Z2T5 733 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 IFNLR1Q8IU57 520 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 ZNF710Q8N1W2 664 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 NME8Q8N427 588 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 RETREG2Q8NC44 543 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 RASSF8Q8NHQ8 419 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 DDX12PQ92771 950 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 LRRC27Q9C0I9 530 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 C17orf75Q9HAS0 396 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 MYH11P35749 1972 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 GTPBP6O43824 516 aaPredicted RBP16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 GPR32O75388 356 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 MBD3O95983 291 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 CLCN3P51790 818 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 ATN1P54259 1190 aaPredicted RBP16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 CUL4BQ13620 913 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 FAM47CQ5HY64 1035 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 RBM43Q6ZSC3 357 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 CEP57L1Q8IYX8 460 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 LRRC71Q8N4P6 559 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 CNNM3Q8NE01 707 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 KIFAP3Q92845 792 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 VTI1AQ96AJ9 217 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 NFKBIZQ9BYH8 718 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 ADAMTS10Q9H324 1103 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 GPRC5CQ9NQ84 441 aa16.43■□□□□ 0.22
SNRPA1-207ENST00000559309 LTBP2Q14767 1821 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 NPHP3-ACAD11A0A0J9YXS1 232 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 PVALEFA0A1B0GWK0 134 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 ASAP2O43150 1006 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 HIP1RO75146 1068 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 PRR29P0C7W0 189 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 PTMSP20962 102 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 GLRA2P23416 452 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 SARSP49591 514 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 AMPD3Q01432 767 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 GRAMD1CQ8IYS0 662 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 CAGE1Q8TC20 777 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 ASAP3Q8TDY4 903 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 TCP11Q8WWU5 503 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 PRPF31Q8WWY3 499 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 BSNDQ8WZ55 320 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 STAMQ92783 540 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 TMEM143Q96AN5 459 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 NOC4LQ9BVI4 516 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 STRA6Q9BX79 667 aa16.42■□□□□ 0.22
SNRPA1-207ENST00000559309 RSPH10B2B2RC85 870 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 KIAA0355O15063 1070 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 RSPH10BP0C881 870 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 CASP1P29466 404 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 GPC3P51654 580 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 CDC42EP1Q00587 391 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 MXD4Q14582 209 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 GPNMBQ14956 572 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 POSTNQ15063 836 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 NFKBIBQ15653 356 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 KLHL40Q2TBA0 621 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 CDCA2Q69YH5 1023 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 DNAJB3Q8WWF6 145 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 SPIRE2Q8WWL2 714 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 DRC1Q96MC2 740 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 CLSTN2Q9H4D0 955 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 ST6GALNAC4Q9H4F1 302 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 IFT122Q9HBG6 1241 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 OLFML3Q9NRN5 406 aa16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 SUCLA2Q9P2R7 463 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-207ENST00000559309 DCDC2CA8MYV0 355 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 TLR3O15455 904 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 PQBP1O60828 265 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 KINO60870 393 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 CHRNA1P02708 482 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 SSBP05455 408 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 MAPTP10636 758 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 CKBP12277 381 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 PLS3P13797 630 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 TMOD1P28289 359 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 AFMP43652 599 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 NCKAP1LP55160 1127 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 LAMTOR4Q0VGL1 99 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 CAPSQ13938 189 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 DHX8Q14562 1220 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 UNC13DQ70J99 1090 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 ZNF410Q86VK4 478 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 PSPC1Q8WXF1 523 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 VWCEQ96DN2 955 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 CCDC43Q96MW1 224 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 POLR3FQ9H1D9 316 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 BMP2KQ9NSY1 1161 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 ARHGAP28Q9P2N2 729 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 SEL1LQ9UBV2 794 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 COL4A3BPQ9Y5P4 624 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 SQORQ9Y6N5 450 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 ADGRA3Q8IWK6 1321 aa16.4■□□□□ 0.22
SNRPA1-207ENST00000559309 LAMA3Q16787 3333 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 PPP1R37O75864 691 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms