RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 B4E171 279 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 ERC2O15083 957 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 ATP4AP20648 1035 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 SCTRP47872 440 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 CSE1LP55060 971 aaKnown RBP6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 KBTBD12Q3ZCT8 623 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 SH3PXD2AQ5TCZ1 1133 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 SASS6Q6UVJ0 657 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 TPTE2Q6XPS3 522 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 NUP54Q7Z3B4 507 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 NLRP13Q86W25 1043 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 ZNF619Q8N2I2 560 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 PDCD7Q8N8D1 485 aaKnown RBP6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 KCNG4Q8TDN1 519 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 RILPL2Q969X0 211 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 FERMT2Q96AC1 680 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 NLRP3Q96P20 1036 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 OSBPL10Q9BXB5 764 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 SENP2Q9HC62 589 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 AKAP7Q9P0M2 348 aaPredicted RBP6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 NDOR1Q9UHB4 597 aa6.35□□□□□ -1.39
CTDSPL2-206ENST00000559175 RGPD2P0DJD1 1756 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 CPDO75976 1380 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 ITGB4P16144 1822 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 GOLGA6L10A0A0M3HER8 536 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 GJB3O75712 270 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 BAG4O95429 457 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 BTF3P20290 206 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 NLRP5P59047 1200 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 CAMK2GQ13555 558 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 IFFO2Q5TF58 517 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 LIN54Q6MZP7 749 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 OR2C3Q8N628 320 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 IL17RDQ8NFM7 739 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 CENPIQ92674 756 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 SIN3AQ96ST3 1273 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 TRIT1Q9H3H1 467 aaKnown RBP6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 SNX4O95219 450 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 GOSR1O95249 250 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 CYP1A2P05177 515 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 CELA3AP09093 270 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 RANBP1P43487 201 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 DCAF7P61962 342 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 MAP3K10Q02779 954 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 TNFAIP2Q03169 654 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 ITIH3Q06033 890 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 BNIP1Q12981 228 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 MPP3Q13368 585 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 GRAMD1CQ8IYS0 662 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 LRRC43Q8N309 656 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 PDCL2Q8N4E4 241 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 ACSF2Q96CM8 615 aaPredicted RBP6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 RHOVQ96L33 236 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 NMRK2Q9NPI5 230 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
CTDSPL2-206ENST00000559175 BIN1O00499 593 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 FRAT2O75474 233 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 PDHA1P08559 390 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 STMN1P16949 149 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 SKIV2L2P42285 1042 aaKnown RBP6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 LRMPQ12912 555 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 NOLC1Q14978 699 aaKnown RBP eCLIP6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 ARHGEF6Q15052 776 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 LYPD8Q6UX82 237 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 FAM196AQ6ZSG2 479 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 PPM1KQ8N3J5 372 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 ATG16L2Q8NAA4 619 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 MIGA1Q8NAN2 632 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 MIPOL1Q8TD10 442 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 DDX1Q92499 740 aaKnown RBP6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 SPATA17Q96L03 361 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 NOC4LQ9BVI4 516 aaKnown RBP6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 MTFR1LQ9H019 292 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 INCENPQ9NQS7 918 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 KRT84Q9NSB2 600 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZNF711Q9Y462 761 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 TMEM229AB2RXF0 380 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 MTSS1O43312 755 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 H2AFYO75367 372 aaKnown RBP6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 ERLIN1O75477 346 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 EPN2O95208 641 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 PAHP00439 452 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 PCP11498 1178 aaKnown RBP6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 TNFSF4P23510 183 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 TM4SF4P48230 202 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 CENPAP49450 140 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 LRRC74AQ0VAA2 488 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 PKN1Q16512 942 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 KDELC1Q6UW63 502 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZBTB33Q86T24 672 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 NOSTRINQ8IVI9 506 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 GOT1L1Q8NHS2 421 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 FNIP1Q8TF40 1166 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 BTN2A2Q8WVV5 523 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 PHF12Q96QT6 1004 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 FNBP1Q96RU3 617 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 PIGSQ96S52 555 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 MXD3Q9BW11 206 aa6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 AGO4Q9HCK5 861 aaKnown RBP6.33□□□□□ -1.4
CTDSPL2-206ENST00000559175 A0A1B0GUL6 1792 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms