RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 NACC1Q96RE7 527 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 RAB34Q9BZG1 259 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 BHMT2Q9H2M3 363 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 MINDY3Q9H8M7 445 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 IFT122Q9HBG6 1241 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 POLD4Q9HCU8 107 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 ERVK-5Q9HDB9 667 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 SUCLA2Q9P2R7 463 aaPredicted RBP12.75□□□□□ -0.37
SNX1-204ENST00000559061 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 NOC2LQ9Y3T9 749 aaKnown RBP12.75□□□□□ -0.37
SNX1-204ENST00000559061 PPME1Q9Y570 386 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 CSDE1O75534 798 aaKnown RBP12.74□□□□□ -0.37
SNX1-204ENST00000559061 PFKMP08237 780 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 GLRA2P23416 452 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 CD52P31358 61 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 POLGP54098 1239 aaPredicted RBP12.74□□□□□ -0.37
SNX1-204ENST00000559061 NLRP11P59045 1033 aaKnown RBP12.74□□□□□ -0.37
SNX1-204ENST00000559061 DEFB103AP81534 67 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 STK38Q15208 465 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 ARSHQ5FYA8 562 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 CNKSR3Q6P9H4 555 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 PSRC1Q6PGN9 363 aaPredicted RBP12.74□□□□□ -0.37
SNX1-204ENST00000559061 PADI6Q6TGC4 694 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNX1-204ENST00000559061 TSHZ1Q6ZSZ6 1077 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 C1orf186Q6ZWK4 172 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 OTUD6AQ7L8S5 288 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 TMCO2Q7Z6W1 182 aaPredicted RBP12.74□□□□□ -0.37
SNX1-204ENST00000559061 RTN4RL1Q86UN2 441 aaPredicted RBP12.74□□□□□ -0.37
SNX1-204ENST00000559061 LEO1Q8WVC0 666 aaPredicted RBP12.74□□□□□ -0.37
SNX1-204ENST00000559061 MTRQ99707 1265 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 ATP6V0A4Q9HBG4 840 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 AKT3Q9Y243 479 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 CDH23Q9H251 3354 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 MYH11P35749 1972 aa12.74□□□□□ -0.37
SNX1-204ENST00000559061 TTC3P53804 2025 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 ADGRA3Q8IWK6 1321 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 A0A087WZ62 844 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 A0A1W2PPC1 479 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 GRXCR1A8MXD5 290 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 DGAT1O75907 488 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 PARNO95453 639 aaKnown RBP12.73□□□□□ -0.37
SNX1-204ENST00000559061 EDN1P05305 212 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 CYP11B2P19099 503 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 FGFR4P22455 802 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 CRYBB1P53674 252 aaPredicted RBP12.73□□□□□ -0.37
SNX1-204ENST00000559061 WDR5P61964 334 aaKnown RBP12.73□□□□□ -0.37
SNX1-204ENST00000559061 LAMTOR4Q0VGL1 99 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 CAPSQ13938 189 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 E2F4Q16254 413 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 HABP4Q5JVS0 413 aaKnown RBP12.73□□□□□ -0.37
SNX1-204ENST00000559061 IER5Q5VY09 327 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 RINT1Q6NUQ1 792 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 RSPH3Q86UC2 560 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 CRIPAKQ8N1N5 446 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 PRPF31Q8WWY3 499 aaKnown RBP12.73□□□□□ -0.37
SNX1-204ENST00000559061 SLC7A3Q8WY07 619 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 FDXACB1Q9BRP7 624 aaPredicted RBP12.73□□□□□ -0.37
SNX1-204ENST00000559061 POLR3FQ9H1D9 316 aaPredicted RBP12.73□□□□□ -0.37
SNX1-204ENST00000559061 GDPD2Q9HCC8 539 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 COL4A3BPQ9Y5P4 624 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 CHD9Q3L8U1 2897 aa12.73□□□□□ -0.37
SNX1-204ENST00000559061 NPHP3-ACAD11A0A0J9YXS1 232 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 SLC26A4O43511 780 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 ARHGEF15O94989 841 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 FGBP02675 491 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 DARSP14868 501 aaKnown RBP12.72□□□□□ -0.37
SNX1-204ENST00000559061 ANP32AP39687 249 aaKnown RBP12.72□□□□□ -0.37
SNX1-204ENST00000559061 MCM6Q14566 821 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 DSC3Q14574 896 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 ZRSR1Q15695 479 aaKnown RBP12.72□□□□□ -0.37
SNX1-204ENST00000559061 MAEAQ7L5Y9 396 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 RHPN2Q8IUC4 686 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 RPUSD2Q8IZ73 545 aaKnown RBP12.72□□□□□ -0.37
SNX1-204ENST00000559061 SYT2Q8N9I0 419 aaPredicted RBP12.72□□□□□ -0.37
SNX1-204ENST00000559061 RAD54LQ92698 747 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 RNPC3Q96LT9 517 aaKnown RBP12.72□□□□□ -0.37
SNX1-204ENST00000559061 MAP7D2Q96T17 732 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 IFIH1Q9BYX4 1025 aaKnown RBP12.72□□□□□ -0.37
SNX1-204ENST00000559061 PADI3Q9ULW8 664 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 GINS2Q9Y248 185 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 SQORQ9Y6N5 450 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 CHD7Q9P2D1 2997 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 KIAA1671Q9BY89 1806 aa12.72□□□□□ -0.37
SNX1-204ENST00000559061 ARHGEF35A5YM69 484 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 GAS2O43903 313 aaKnown RBP12.71□□□□□ -0.37
SNX1-204ENST00000559061 CUTAO60888 179 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 RPLP2P05387 115 aaKnown RBP12.71□□□□□ -0.37
SNX1-204ENST00000559061 PLA2G4BP0C869 781 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 PBX2P40425 430 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 UBA7P41226 1012 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 NUCB2P80303 420 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 AMHR2Q16671 573 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 LRIT3Q3SXY7 679 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 RESP18Q5W5W9 173 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 IFNLR1Q8IU57 520 aaPredicted RBP12.71□□□□□ -0.37
SNX1-204ENST00000559061 KCNG4Q8TDN1 519 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 PSPC1Q8WXF1 523 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms