RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 THEMIS2Q5TEJ8 643 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 ZNF746Q6NUN9 644 aaPredicted RBP13.17□□□□□ -0.3
SEC11A-206ENST00000558924 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 SNX24Q9Y343 169 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.17□□□□□ -0.3
SEC11A-206ENST00000558924 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
SEC11A-206ENST00000558924 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 HARSP12081 509 aaKnown RBP13.17□□□□□ -0.3
SEC11A-206ENST00000558924 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
SEC11A-206ENST00000558924 KLHDC7AQ5VTJ3 777 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 EMBQ6PCB8 327 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 FUKQ8N0W3 1084 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 FAM84AQ96KN4 292 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 OSBPL7Q9BZF2 842 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 MAGEF1Q9HAY2 307 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 KDM3AQ9Y4C1 1321 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 TRIP13Q15645 432 aaPredicted RBP13.16□□□□□ -0.3
SEC11A-206ENST00000558924 PODNQ7Z5L7 613 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 TAB3Q8N5C8 712 aaPredicted RBP13.16□□□□□ -0.3
SEC11A-206ENST00000558924 AENQ8WTP8 325 aaKnown RBP13.16□□□□□ -0.3
SEC11A-206ENST00000558924 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 EIF2AK1Q9BQI3 630 aaKnown RBP13.16□□□□□ -0.3
SEC11A-206ENST00000558924 ZNF577Q9BSK1 485 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 PLAGL2Q9UPG8 496 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 ANO9A1A5B4 782 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 DCDC2CA8MYV0 355 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 TISP43B9A030 160 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 CAND2O75155 1236 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 FGGP02679 453 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 SMTNP53814 917 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 PDXDC1Q6P996 788 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 MYCBPAPQ8TBZ2 947 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 IRAK4Q9NWZ3 460 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 TBK1Q9UHD2 729 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 ANKRD36CQ5JPF3 1778 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 GAKO14976 1311 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 PAPPAQ13219 1627 aa13.16□□□□□ -0.3
SEC11A-206ENST00000558924 TARSL2A2RTX5 802 aaKnown RBP13.15□□□□□ -0.3
SEC11A-206ENST00000558924 MSH4O15457 936 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 SART1O43290 800 aaKnown RBP13.15□□□□□ -0.3
SEC11A-206ENST00000558924 ERFP50548 548 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 PDIA5Q14554 519 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 ALKBH5Q6P6C2 394 aaKnown RBP13.15□□□□□ -0.3
SEC11A-206ENST00000558924 TMEM179Q6ZVK1 233 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 SH3BP5LQ7L8J4 393 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 VPS36Q86VN1 386 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 CACNA2D3Q8IZS8 1091 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 GLG1Q92896 1179 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 ELAC2Q9BQ52 826 aaKnown RBP13.15□□□□□ -0.3
SEC11A-206ENST00000558924 YIPF3Q9GZM5 350 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 PHLPP1O60346 1717 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 GSTTP1A0A1W2PQM5 241 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 KIF4AO95239 1232 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 FLT3P36888 993 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 DNAJC19Q96DA6 116 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 AGBL1Q96MI9 1066 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 A1CFQ9NQ94 594 aaKnown RBP13.15□□□□□ -0.3
SEC11A-206ENST00000558924 CCPG1Q9ULG6 757 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 POLR2MP0CAP2 368 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 EZRP15311 586 aaKnown RBP13.15□□□□□ -0.3
SEC11A-206ENST00000558924 GABPAQ06546 454 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 WLSQ5T9L3 541 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 SLFN12Q8IYM2 578 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 PURBQ96QR8 312 aaKnown RBP13.15□□□□□ -0.3
SEC11A-206ENST00000558924 ERGIC2Q96RQ1 377 aa13.15□□□□□ -0.3
SEC11A-206ENST00000558924 P2RX7Q99572 595 aaKnown RBP13.15□□□□□ -0.3
SEC11A-206ENST00000558924 K7ENM7 598 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 NR3C1P04150 777 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 SSTR3P32745 418 aaPredicted RBP13.14□□□□□ -0.31
SEC11A-206ENST00000558924 PPP1R2P41236 205 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 PTK2Q05397 1052 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 MICAL1Q8TDZ2 1067 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 NSMCE1Q8WV22 266 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 ATP6V1G3Q96LB4 118 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 USP20Q9Y2K6 914 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 A0A1B0GUA9 196 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 MEIS2O14770 477 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 MDH1P40925 334 aaKnown RBP13.14□□□□□ -0.31
SEC11A-206ENST00000558924 GLYCTKQ8IVS8 523 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 FAM186BQ8IYM0 893 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
SEC11A-206ENST00000558924 GDAP1Q8TB36 358 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 ZNF341Q9BYN7 854 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 UTP11Q9Y3A2 253 aaKnown RBP13.14□□□□□ -0.31
SEC11A-206ENST00000558924 AKAP3O75969 853 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
SEC11A-206ENST00000558924 RPL13P26373 211 aaKnown RBP13.14□□□□□ -0.31
SEC11A-206ENST00000558924 CRYMQ14894 314 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 LRRC55Q6ZSA7 311 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 FMNL3Q8IVF7 1028 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 FAM167BQ9BTA0 163 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 EPN3Q9H201 632 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 RAVER2Q9HCJ3 691 aaKnown RBP13.14□□□□□ -0.31
SEC11A-206ENST00000558924 SIK3Q9Y2K2 1263 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 FRMD4BQ9Y2L6 1034 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms