RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 ADGRE1Q14246 886 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 FAM26DQ5JW98 314 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 EFCAB12Q6NXP0 572 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 KIAA0319LQ8IZA0 1049 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 PHOSPHO2Q8TCD6 241 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 YME1L1Q96TA2 773 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 OSMRQ99650 979 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 CELF4Q9BZC1 486 aaKnown RBP13.5□□□□□ -0.25
TPM1-216ENST00000558910 PRDM6Q9NQX0 595 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 PRUNE2Q8WUY3 3088 aa13.5□□□□□ -0.25
TPM1-216ENST00000558910 A0A0C4DFX4 3053 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 TMEM265A0A087WTH1 108 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.49□□□□□ -0.25
TPM1-216ENST00000558910 GJB5O95377 273 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 BAG4O95429 457 aaKnown RBP13.49□□□□□ -0.25
TPM1-216ENST00000558910 C22orf31O95567 290 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 FGFR4P22455 802 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 TXKP42681 527 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 TAP1Q03518 808 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 CTTNQ14247 550 aaKnown RBP13.49□□□□□ -0.25
TPM1-216ENST00000558910 SKIV2LQ15477 1246 aaKnown RBP13.49□□□□□ -0.25
TPM1-216ENST00000558910 ZNF174Q15697 407 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 CALCRLQ16602 461 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 MCTP1Q6DN14 999 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 TSHZ1Q6ZSZ6 1077 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 USP38Q8NB14 1042 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 GDPD5Q8WTR4 605 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 HAS1Q92839 578 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 TNFRSF25Q93038 417 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 DYDC2Q96IM9 177 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 MBOAT7Q96N66 472 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 RAD9AQ99638 391 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 SH2B1Q9NRF2 756 aaPredicted RBP13.49□□□□□ -0.25
TPM1-216ENST00000558910 RGL1Q9NZL6 768 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 PADI3Q9ULW8 664 aa13.49□□□□□ -0.25
TPM1-216ENST00000558910 NOC2LQ9Y3T9 749 aaKnown RBP13.49□□□□□ -0.25
TPM1-216ENST00000558910 ZBTB39O15060 712 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 EFCAB14O75071 495 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 CSDE1O75534 798 aaKnown RBP13.48□□□□□ -0.25
TPM1-216ENST00000558910 RPS6KA5O75582 802 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 GCFC2P16383 781 aaKnown RBP13.48□□□□□ -0.25
TPM1-216ENST00000558910 NPEPPSP55786 919 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 TBC1D8BQ0IIM8 1120 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 PAN2Q504Q3 1202 aaKnown RBP13.48□□□□□ -0.25
TPM1-216ENST00000558910 PPP4R3AQ6IN85 833 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 MOXD1Q6UVY6 613 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 TPH2Q8IWU9 490 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 FAM167AQ96KS9 214 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 MAP7D2Q96T17 732 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 KCNMB3Q9NPA1 279 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 VAV3Q9UKW4 847 aa13.48□□□□□ -0.25
TPM1-216ENST00000558910 COL1A2P08123 1366 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 LINC01553A4QN01 128 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 ENPP3O14638 875 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 NEMFO60524 1076 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 NLRP11P59045 1033 aaKnown RBP13.47□□□□□ -0.25
TPM1-216ENST00000558910 HMGN5P82970 282 aaKnown RBP13.47□□□□□ -0.25
TPM1-216ENST00000558910 DRP2Q13474 957 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 FAM177A1Q8N128 213 aaPredicted RBP13.47□□□□□ -0.25
TPM1-216ENST00000558910 TMEM40Q8WWA1 233 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 NLRP7Q8WX94 980 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 LINC01599Q8WXQ3 324 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 APBB2Q92870 758 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 TMX3Q96JJ7 454 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 FAM20AQ96MK3 541 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 TBC1D32Q96NH3 1257 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 NAP1L4Q99733 375 aaKnown RBP13.47□□□□□ -0.25
TPM1-216ENST00000558910 LLPHQ9BRT6 129 aaKnown RBP13.47□□□□□ -0.25
TPM1-216ENST00000558910 C17orf80Q9BSJ5 609 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 WRAP73Q9P2S5 460 aaPredicted RBP13.47□□□□□ -0.25
TPM1-216ENST00000558910 TSR3Q9UJK0 312 aaKnown RBP13.47□□□□□ -0.25
TPM1-216ENST00000558910 CEP131Q9UPN4 1083 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 PTPRSQ13332 1948 aa13.47□□□□□ -0.25
TPM1-216ENST00000558910 EVPLQ92817 2033 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 MYH9P35579 1960 aaKnown RBP13.46□□□□□ -0.25
TPM1-216ENST00000558910 DENND3A2RUS2 1198 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 TMOD1P28289 359 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 GATMP50440 423 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 PSMC5P62195 406 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 XKR3Q5GH77 459 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 RPAINQ86UA6 219 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 NME8Q8N427 588 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 CEP170P1Q96L14 293 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 LXNQ9BS40 222 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 LRFN2Q9ULH4 789 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 ST3GAL5Q9UNP4 418 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 INSL6Q9Y581 213 aa13.46□□□□□ -0.25
TPM1-216ENST00000558910 MAGEB2O15479 319 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 MGEA5O60502 916 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 GJB2P29033 226 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 QARSP47897 775 aaKnown RBP13.45□□□□□ -0.26
TPM1-216ENST00000558910 PPP2R5CQ13362 524 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 EPHA7Q15375 998 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 ANO5Q75V66 913 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 RTN4RL1Q86UN2 441 aaPredicted RBP13.45□□□□□ -0.26
TPM1-216ENST00000558910 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 RHPN2Q8IUC4 686 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 KSR1Q8IVT5 923 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 SLFN12Q8IYM2 578 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms