RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 PCDHB6Q9Y5E3 794 aa6.53□□□□□ -1.36
CHRNA3-203ENST00000558903 IGKV6D-21A0A0A0MT36 114 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 ARHGEF35A5YM69 484 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 VWA3AA6NCI4 1184 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 FGBP02675 491 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 CKBP12277 381 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 IBSPP21815 317 aaPredicted RBP6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 KLRC1P26715 233 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 YWHABP31946 246 aaKnown RBP6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 MRPS6P82932 125 aaKnown RBP6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 ZNF200P98182 395 aaPredicted RBP6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 TMEM62Q0P6H9 643 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 CTTNQ14247 550 aaKnown RBP6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 UGCGQ16739 394 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 FOXD4L6Q3SYB3 417 aaPredicted RBP6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 ODR4Q5SWX8 454 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 PLA2G4FQ68DD2 849 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 MTHFD1LQ6UB35 978 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 FOXD4L3Q6VB84 417 aaPredicted RBP6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 DNAJB3Q8WWF6 145 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 TCP11Q8WWU5 503 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 SEPT8Q92599 483 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 HAS1Q92839 578 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 CALML4Q96GE6 196 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 CEP170P1Q96L14 293 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 PPP1R16BQ96T49 567 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 PCYT2Q99447 389 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 KRTAP3-3Q9BYR6 98 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 TUFT1Q9NNX1 390 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 PCDHB3Q9Y5E6 796 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 ATP6V1DQ9Y5K8 247 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 MAFBQ9Y5Q3 323 aaPredicted RBP6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 TRPV2Q9Y5S1 764 aa6.52□□□□□ -1.37
CHRNA3-203ENST00000558903 UMODL1Q5DID0 1318 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 RALGAPA2Q2PPJ7 1873 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 SMIM35A0A1B0GVV1 85 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 A0A1W2PPC1 479 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 EML1O00423 815 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 GAS2O43903 313 aaKnown RBP6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 TRAK2O60296 914 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 EFCAB14O75071 495 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 F13A1P00488 732 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 SSBP05455 408 aaKnown RBP eCLIP6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 KRT18P05783 430 aaKnown RBP6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 IQCF3P0C7M6 154 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 ZSCAN22P10073 491 aaPredicted RBP6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 ACRP10323 421 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 PRPHP41219 470 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 UBA7P41226 1012 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 ATP2C1P98194 919 aaPredicted RBP6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 GUCA2AQ02747 115 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 RESTQ13127 1097 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 PAK2Q13177 524 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 IKBKEQ14164 716 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 ZNF618Q5T7W0 954 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 EFCAB12Q6NXP0 572 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 CNKSR3Q6P9H4 555 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 THSD4Q6ZMP0 1018 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 RUFY4Q6ZNE9 571 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 OTOP2Q7RTS6 562 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 C4orf19Q8IY42 314 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 LRRC71Q8N4P6 559 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 NACC1Q96RE7 527 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 MTRQ99707 1265 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 NT5C3AQ9H0P0 336 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 WNT8AQ9H1J5 351 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 TMEM60Q9H2L4 133 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 ATP6V0A4Q9HBG4 840 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 CYP26B1Q9NR63 512 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 RGL1Q9NZL6 768 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 MTMR6Q9Y217 621 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 PPME1Q9Y570 386 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 PCDHA2Q9Y5H9 948 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 CDY2AQ9Y6F7 541 aa6.51□□□□□ -1.37
CHRNA3-203ENST00000558903 KIAA1671Q9BY89 1806 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 TDRD15B5MCY1 1934 aaKnown RBP6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 COL4A4P53420 1690 aaPredicted RBP6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 TMEM150BA6NC51 233 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 WNT7AO00755 349 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 EDIL3O43854 480 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 ZNF862O60290 1169 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 USO1O60763 962 aaKnown RBP6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 BAIAP3O94812 1187 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 C22orf31O95567 290 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 AMHP03971 560 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 VTNP04004 478 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 GHRP10912 638 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 BMP8BP34820 402 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 TOB1P50616 345 aaPredicted RBP6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 CLCN3P51790 818 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 NFX1Q12986 1120 aaKnown RBP6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 TFDP1Q14186 410 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 EMC2Q15006 297 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 ARL6IP4Q66PJ3 421 aaKnown RBP6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 POTEGQ6S5H5 508 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 TSHZ1Q6ZSZ6 1077 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 ZNF365Q70YC5 407 aa6.5□□□□□ -1.37
CHRNA3-203ENST00000558903 CABP7Q86V35 215 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms