RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 KARSQ15046 597 aaKnown RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 DGKDQ16760 1214 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 HSP90AA4PQ58FG1 418 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 CDKAL1Q5VV42 579 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 FAM160B1Q5W0V3 765 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 KRT79Q5XKE5 535 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 ABHD15Q6UXT9 468 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 CABP7Q86V35 215 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 ZNF710Q8N1W2 664 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 OR6J1Q8NGC5 347 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 NOC3LQ8WTT2 800 aaKnown RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 NELFBQ8WX92 580 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 TRIM43Q96BQ3 446 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 VWCEQ96DN2 955 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 CCDC51Q96ER9 411 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 PCYT2Q99447 389 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 GPR20Q99678 358 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 HSD17B14Q9BPX1 270 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 NAA15Q9BXJ9 866 aaKnown RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 AP5M1Q9H0R1 490 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 TSPYL2Q9H2G4 693 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 SAMSN1Q9NSI8 373 aaKnown RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 INTS13Q9NVM9 706 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 MAGEC2Q9UBF1 373 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 ZNF215Q9UL58 517 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 MAFBQ9Y5Q3 323 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 ITIH6Q6UXX5 1313 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 COL1A2P08123 1366 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 H0YGN5 161 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 NOP56O00567 594 aaKnown RBP8.48□□□□□ -1.05
LRRC28-211ENST00000558890 PSMA7O14818 248 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 GAS2O43903 313 aaKnown RBP8.48□□□□□ -1.05
LRRC28-211ENST00000558890 SLU7O95391 586 aaKnown RBP8.48□□□□□ -1.05
LRRC28-211ENST00000558890 CCNE2O96020 404 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 F2P00734 622 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 SUPT20HL2P0C7V6 817 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 CD44P16070 742 aaKnown RBP8.48□□□□□ -1.05
LRRC28-211ENST00000558890 SCP2P22307 547 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 CASP1P29466 404 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 QARSP47897 775 aaKnown RBP8.48□□□□□ -1.05
LRRC28-211ENST00000558890 ACTR2P61160 394 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 PSMC5P62195 406 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 PSMC6P62333 389 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 AMPD3Q01432 767 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 FAAP100Q0VG06 881 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 NR1I3Q14994 352 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 IL17AQ16552 155 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 NBPF20Q3BBV1 942 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 CYFIP1Q7L576 1253 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 MIER3Q7Z3K6 550 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 SESTD1Q86VW0 696 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 CNGA4Q8IV77 575 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 PDCL2Q8N4E4 241 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 ANKRD7Q92527 254 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 STAMQ92783 540 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 CALML4Q96GE6 196 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 SPATA33Q96N06 139 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 PANX2Q96RD6 677 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 HTATIP2Q9BUP3 242 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 TIPINQ9BVW5 301 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 LRRC27Q9C0I9 530 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 TMX1Q9H3N1 280 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 UNC45AQ9H3U1 944 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 SMARCAD1Q9H4L7 1026 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 ZSWIM4Q9H7M6 989 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 ERAP1Q9NZ08 941 aa8.48□□□□□ -1.05
LRRC28-211ENST00000558890 CGNQ9P2M7 1197 aaKnown RBP8.48□□□□□ -1.05
LRRC28-211ENST00000558890 LIMA1Q9UHB6 759 aaKnown RBP8.48□□□□□ -1.05
LRRC28-211ENST00000558890 DBR1Q9UK59 544 aaKnown RBP8.48□□□□□ -1.05
LRRC28-211ENST00000558890 A0A0U1RQG5 324 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-211ENST00000558890 TCF7P36402 384 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-211ENST00000558890 TECP42680 631 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 ETF1P62495 437 aaKnown RBP8.47□□□□□ -1.05
LRRC28-211ENST00000558890 ADAM17P78536 824 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 PTPN11Q06124 597 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-211ENST00000558890 ITGA7Q13683 1181 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 TRIM60Q495X7 471 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 TMEM119Q4V9L6 283 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 XKR3Q5GH77 459 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 CNNM4Q6P4Q7 775 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 SYT10Q6XYQ8 523 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 FAM114A1Q8IWE2 563 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 FAM126BQ8IXS8 530 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 SMYD4Q8IYR2 804 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-211ENST00000558890 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-211ENST00000558890 KCNN1Q92952 543 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 CDK5RAP3Q96JB5 506 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 NACC1Q96RE7 527 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 EIF2AK1Q9BQI3 630 aaKnown RBP8.47□□□□□ -1.05
LRRC28-211ENST00000558890 JPH2Q9BR39 696 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-211ENST00000558890 MTG1Q9BT17 334 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-211ENST00000558890 SRRTQ9BXP5 876 aaKnown RBP8.47□□□□□ -1.05
LRRC28-211ENST00000558890 AZI2Q9H6S1 392 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 STARD7Q9NQZ5 370 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 PDLIM7Q9NR12 457 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 ANKEF1Q9NU02 776 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 EXOC1Q9NV70 894 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 TBX21Q9UL17 535 aa8.47□□□□□ -1.05
LRRC28-211ENST00000558890 PPP2R2CQ9Y2T4 447 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms