RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 LINC00271P0C7V0 271 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 EIF4BP23588 611 aaKnown RBP14.03□□□□□ -0.16
SMAD3-208ENST00000558827 SARSP49591 514 aaKnown RBP14.03□□□□□ -0.16
SMAD3-208ENST00000558827 DSC3Q14574 896 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 SAFBQ15424 915 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMAD3-208ENST00000558827 XKR9Q5GH70 373 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 FAM184AQ8NB25 1140 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 IL27Q8NEV9 243 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 ATXN2LQ8WWM7 1075 aaKnown RBP14.03□□□□□ -0.16
SMAD3-208ENST00000558827 CEP170P1Q96L14 293 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 ZSCAN31Q96LW9 406 aaPredicted RBP14.03□□□□□ -0.16
SMAD3-208ENST00000558827 NLRP4Q96MN2 994 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 NAP1L4Q99733 375 aaKnown RBP14.03□□□□□ -0.16
SMAD3-208ENST00000558827 LXNQ9BS40 222 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 CYP26B1Q9NR63 512 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 RGS18Q9NS28 235 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 VCANP13611 3396 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 COL4A6Q14031 1691 aa14.02□□□□□ -0.16
SMAD3-208ENST00000558827 C9IYK1 514 aa14.02□□□□□ -0.17
SMAD3-208ENST00000558827 TBX3O15119 743 aa14.02□□□□□ -0.17
SMAD3-208ENST00000558827 DARSP14868 501 aaKnown RBP14.02□□□□□ -0.17
SMAD3-208ENST00000558827 NBR1Q14596 966 aa14.02□□□□□ -0.17
SMAD3-208ENST00000558827 TCEAL5Q5H9L2 206 aa14.02□□□□□ -0.17
SMAD3-208ENST00000558827 CRIPAKQ8N1N5 446 aa14.02□□□□□ -0.17
SMAD3-208ENST00000558827 ADAMTS19Q8TE59 1207 aa14.02□□□□□ -0.17
SMAD3-208ENST00000558827 HLA-CQ95604 372 aa14.02□□□□□ -0.17
SMAD3-208ENST00000558827 MRPL38Q96DV4 380 aaKnown RBP14.02□□□□□ -0.17
SMAD3-208ENST00000558827 SAMD11Q96NU1 681 aa14.02□□□□□ -0.17
SMAD3-208ENST00000558827 EIF2AK1Q9BQI3 630 aaKnown RBP14.02□□□□□ -0.17
SMAD3-208ENST00000558827 TTC12Q9H892 705 aaPredicted RBP14.02□□□□□ -0.17
SMAD3-208ENST00000558827 PCDHA12Q9UN75 941 aa14.02□□□□□ -0.17
SMAD3-208ENST00000558827 SPTBN5Q9NRC6 3674 aaKnown RBP14.02□□□□□ -0.17
SMAD3-208ENST00000558827 NCOR1O75376 2440 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 POTEMA6NI47 508 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 NEMFO60524 1076 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 MAFO75444 373 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-208ENST00000558827 SLITRK3O94933 977 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 CD2BP2O95400 341 aaKnown RBP14.01□□□□□ -0.17
SMAD3-208ENST00000558827 SRGAP2CP0DJJ0 459 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 ZSCAN20P17040 1043 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-208ENST00000558827 RBM25P49756 843 aaKnown RBP14.01□□□□□ -0.17
SMAD3-208ENST00000558827 DNM2P50570 870 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 POLGP54098 1239 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-208ENST00000558827 SPIRE1Q08AE8 756 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 GNL2Q13823 731 aaKnown RBP14.01□□□□□ -0.17
SMAD3-208ENST00000558827 PTPROQ16827 1216 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 ODR4Q5SWX8 454 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 SLC24A5Q71RS6 500 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 SLFN12Q8IYM2 578 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 CMTR2Q8IYT2 770 aaKnown RBP14.01□□□□□ -0.17
SMAD3-208ENST00000558827 KLHL23Q8NBE8 558 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 GCOM2Q9BZD3 368 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-208ENST00000558827 IGFLR1Q9H665 355 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 ATP6V0A4Q9HBG4 840 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 LMCD1Q9NZU5 365 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 PCDHGC5Q9Y5F6 944 aa14.01□□□□□ -0.17
SMAD3-208ENST00000558827 KIAA1671Q9BY89 1806 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 IGKV6-21A0A0C4DH24 114 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 BMP1P13497 986 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 KCNA5P22460 613 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 DNAJB1P25685 340 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 YWHABP31946 246 aaKnown RBP14□□□□□ -0.17
SMAD3-208ENST00000558827 GTF2F1P35269 517 aaKnown RBP eCLIP14□□□□□ -0.17
SMAD3-208ENST00000558827 RABEP1Q15276 862 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 MAEAQ7L5Y9 396 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 PIGOQ8TEQ8 1089 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 PRPF31Q8WWY3 499 aaKnown RBP14□□□□□ -0.17
SMAD3-208ENST00000558827 SYMPKQ92797 1274 aaKnown RBP14□□□□□ -0.17
SMAD3-208ENST00000558827 LLPHQ9BRT6 129 aaKnown RBP14□□□□□ -0.17
SMAD3-208ENST00000558827 ZSWIM4Q9H7M6 989 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 SH2B1Q9NRF2 756 aaPredicted RBP14□□□□□ -0.17
SMAD3-208ENST00000558827 C1orf112Q9NSG2 853 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 RNF19AQ9NV58 838 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 TYW1Q9NV66 732 aaKnown RBP14□□□□□ -0.17
SMAD3-208ENST00000558827 PLAGL2Q9UPG8 496 aa14□□□□□ -0.17
SMAD3-208ENST00000558827 H3BQ06 376 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-208ENST00000558827 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMAD3-208ENST00000558827 ITGB1P05556 798 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 RB1P06400 928 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 IRS1P35568 1242 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 PBX3P40426 434 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 TECP42680 631 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 FAM189BP81408 668 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 CLUL1Q15846 466 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 CATSPER4Q7RTX7 472 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 ECHDC2Q86YB7 292 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 C4orf19Q8IY42 314 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 FBXO18Q8NFZ0 1043 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 SPPL3Q8TCT6 385 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 CLP1Q92989 425 aaKnown RBP13.99□□□□□ -0.17
SMAD3-208ENST00000558827 LPPQ93052 612 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 MTMR9Q96QG7 549 aa13.99□□□□□ -0.17
SMAD3-208ENST00000558827 UHRF1Q96T88 793 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-208ENST00000558827 C11orf84Q9BUA3 381 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-208ENST00000558827 UBE2ZQ9H832 354 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-208ENST00000558827 FNDC1Q4ZHG4 1894 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-208ENST00000558827 RALGAPA2Q2PPJ7 1873 aa13.98□□□□□ -0.17
SMAD3-208ENST00000558827 HMGN5P82970 282 aaKnown RBP13.98□□□□□ -0.17
SMAD3-208ENST00000558827 LAMTOR4Q0VGL1 99 aa13.98□□□□□ -0.17
SMAD3-208ENST00000558827 CAMK1Q14012 370 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms