RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 CDHR5Q9HBB8 845 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 RNF19AQ9NV58 838 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 PKD2L1Q9P0L9 805 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 WNT16Q9UBV4 365 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 GINS2Q9Y248 185 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 MAP1BP46821 2468 aaKnown RBP7.74□□□□□ -1.17
LRRC28-207ENST00000558500 KIAA1671Q9BY89 1806 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 KRBA1A5PL33 1030 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 MEIS2O14770 477 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 CYTH3O43739 400 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 NARSO43776 548 aaKnown RBP7.74□□□□□ -1.17
LRRC28-207ENST00000558500 CXCL14O95715 111 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 SP9P0CG40 484 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 ITGB5P18084 799 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 SDHBP21912 280 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 CA8P35219 290 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 ATXN1P54253 815 aaKnown RBP7.74□□□□□ -1.17
LRRC28-207ENST00000558500 MFAP1P55081 439 aaKnown RBP7.74□□□□□ -1.17
LRRC28-207ENST00000558500 TBC1D8BQ0IIM8 1120 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 DSC3Q14574 896 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 GRM4Q14833 912 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 SEC23AQ15436 765 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 ARSIQ5FYB1 569 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 TMC5Q6UXY8 1006 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 CCDC149Q6ZUS6 474 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 PLPPR4Q7Z2D5 763 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 GPR149Q86SP6 731 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 KIAA0319LQ8IZA0 1049 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 SUMF1Q8NBK3 374 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 FEZF2Q8TBJ5 459 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 PTCD2Q8WV60 388 aaKnown RBP7.74□□□□□ -1.17
LRRC28-207ENST00000558500 KRT23Q9C075 422 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 IGSF9Q9P2J2 1179 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 PCDHGA4Q9Y5G9 962 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 PLXNA4Q9HCM2 1894 aa7.74□□□□□ -1.17
LRRC28-207ENST00000558500 ANKRD11Q6UB99 2663 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-207ENST00000558500 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-207ENST00000558500 PIK3CDO00329 1044 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 MAFGO15525 162 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 CFHP08603 1231 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 RFX1P22670 979 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 KLRC1P26715 233 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 STAT5BP51692 787 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 PDE1AP54750 535 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 MTMR1Q13613 665 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 BMS1Q14692 1282 aaKnown RBP7.73□□□□□ -1.17
LRRC28-207ENST00000558500 KIAA0319Q5VV43 1072 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 CABP7Q86V35 215 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 FAM228AQ86W67 206 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 C1orf210Q8IVY1 113 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 SLC22A17Q8WUG5 538 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 CUL5Q93034 780 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 ZBP1Q9H171 429 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 CNNM2Q9H8M5 875 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 SFXN1Q9H9B4 322 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 TBC1D17Q9HA65 648 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 JPH1Q9HDC5 661 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-207ENST00000558500 DLGAP2Q9P1A6 1054 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 SLC9A2Q9UBY0 812 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 UBIAD1Q9Y5Z9 338 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 IRAK3Q9Y616 596 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 MYH7BA7E2Y1 1941 aa7.73□□□□□ -1.17
LRRC28-207ENST00000558500 FRYLO94915 3013 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 NT5C1B-RDH14C9J2C7 533 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 DCNP07585 359 aaKnown RBP7.72□□□□□ -1.17
LRRC28-207ENST00000558500 SLC26A2P50443 739 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 CRYBB1P53674 252 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-207ENST00000558500 ACTR2P61160 394 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 GIT2Q14161 759 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 IMMTQ16891 758 aaKnown RBP7.72□□□□□ -1.17
LRRC28-207ENST00000558500 KIZQ2M2Z5 673 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 CLLU1OSQ5K130 101 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 SPECC1Q5M775 1068 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 PHLDB3Q6NSJ2 640 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 ABI1Q8IZP0 508 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 VPS52Q8N1B4 723 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 GPR161Q8N6U8 529 aaKnown RBP7.72□□□□□ -1.17
LRRC28-207ENST00000558500 TMEM87AQ8NBN3 555 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 RSAD2Q8WXG1 361 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 PIBF1Q8WXW3 757 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 AUTS2Q8WXX7 1259 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 TMEM169Q96HH4 297 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 OSMRQ99650 979 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 JADE2Q9NQC1 790 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 CA14Q9ULX7 337 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 PCDHB15Q9Y5E8 787 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 CEP295Q9C0D2 2601 aa7.72□□□□□ -1.17
LRRC28-207ENST00000558500 PRR5-ARHGAP8B1AHC4 643 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 HBP1O60381 514 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 KINO60870 393 aaKnown RBP7.71□□□□□ -1.18
LRRC28-207ENST00000558500 N4BP1O75113 896 aaKnown RBP7.71□□□□□ -1.18
LRRC28-207ENST00000558500 ADRB1P08588 477 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 CTSAP10619 480 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 ALDH7A1P49419 539 aaKnown RBP7.71□□□□□ -1.18
LRRC28-207ENST00000558500 METAP2P50579 478 aaKnown RBP eCLIP7.71□□□□□ -1.18
LRRC28-207ENST00000558500 POLGP54098 1239 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-207ENST00000558500 BCAR1P56945 870 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 ARHGAP8P85298 464 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 TROAPQ12815 778 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 NONOQ15233 471 aaKnown RBP eCLIP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms