RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CDC42EP1Q00587 391 aa13.76□□□□□ -0.21
SMAD3-205ENST00000558428 GRIN1Q05586 938 aa13.76□□□□□ -0.21
SMAD3-205ENST00000558428 NFX1Q12986 1120 aaKnown RBP13.76□□□□□ -0.21
SMAD3-205ENST00000558428 ODR4Q5SWX8 454 aa13.76□□□□□ -0.21
SMAD3-205ENST00000558428 TCP11Q8WWU5 503 aa13.76□□□□□ -0.21
SMAD3-205ENST00000558428 PSPC1Q8WXF1 523 aaKnown RBP13.76□□□□□ -0.21
SMAD3-205ENST00000558428 AK8Q96MA6 479 aa13.76□□□□□ -0.21
SMAD3-205ENST00000558428 XPNPEP1Q9NQW7 623 aa13.76□□□□□ -0.21
SMAD3-205ENST00000558428 PADI3Q9ULW8 664 aa13.76□□□□□ -0.21
SMAD3-205ENST00000558428 NOC2LQ9Y3T9 749 aaKnown RBP13.76□□□□□ -0.21
SMAD3-205ENST00000558428 A0A087WZ62 844 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 AMHP03971 560 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 UBA7P41226 1012 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 STK38Q15208 465 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMAD3-205ENST00000558428 CABP7Q86V35 215 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 ZNF410Q86VK4 478 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 FAM228AQ86W67 206 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 KSR1Q8IVT5 923 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 MYOCDQ8IZQ8 938 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 PHOSPHO2Q8TCD6 241 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
SMAD3-205ENST00000558428 CDK5RAP3Q96JB5 506 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 NLRP4Q96MN2 994 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 FDXACB1Q9BRP7 624 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-205ENST00000558428 PBX4Q9BYU1 374 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 GCOM2Q9BZD3 368 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-205ENST00000558428 NT5C3AQ9H0P0 336 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 BHMT2Q9H2M3 363 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 TFIP11Q9UBB9 837 aaKnown RBP13.75□□□□□ -0.21
SMAD3-205ENST00000558428 DAXXQ9UER7 740 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-205ENST00000558428 DNM3Q9UQ16 869 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 COL4A3BPQ9Y5P4 624 aa13.75□□□□□ -0.21
SMAD3-205ENST00000558428 TTC3P53804 2025 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 E9PMD0 336 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 GPR182O15218 404 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 BRD1O95696 1058 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 DARSP14868 501 aaKnown RBP13.74□□□□□ -0.21
SMAD3-205ENST00000558428 EIF4BP23588 611 aaKnown RBP13.74□□□□□ -0.21
SMAD3-205ENST00000558428 DNAJB2P25686 324 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 NASPP49321 788 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-205ENST00000558428 RABGGTBP53611 331 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 LAMTOR4Q0VGL1 99 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 SLC39A14Q15043 492 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 HYIQ5T013 277 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 PADI6Q6TGC4 694 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 MAEAQ7L5Y9 396 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 TMCO2Q7Z6W1 182 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-205ENST00000558428 HERC6Q8IVU3 1022 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 LINC00301Q8NCQ3 95 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 CALML4Q96GE6 196 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 PLIN2Q99541 437 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 FTHL17Q9BXU8 183 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 CSRNP2Q9H175 543 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 ERVK-5Q9HDB9 667 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 FBXO2Q9UK22 296 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-205ENST00000558428 ST3GAL5Q9UNP4 418 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 SRPRBQ9Y5M8 271 aaKnown RBP13.74□□□□□ -0.21
SMAD3-205ENST00000558428 TCHHQ07283 1943 aa13.74□□□□□ -0.21
SMAD3-205ENST00000558428 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-205ENST00000558428 ASAP2O43150 1006 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 EYA4O95677 639 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 SRGAP2CP0DJJ0 459 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 FGFR4P22455 802 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 PBX2P40425 430 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 GRB10Q13322 594 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 MXD4Q14582 209 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-205ENST00000558428 RAB30Q15771 203 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 SPECC1Q5M775 1068 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 KCNK18Q7Z418 384 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 KRI1Q8N9T8 703 aaKnown RBP13.73□□□□□ -0.21
SMAD3-205ENST00000558428 MCPH1Q8NEM0 835 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 RASSF8Q8NHQ8 419 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 CLIC6Q96NY7 704 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 PNMA5Q96PV4 448 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-205ENST00000558428 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-205ENST00000558428 TMX1Q9H3N1 280 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 MSRAQ9UJ68 235 aa13.73□□□□□ -0.21
SMAD3-205ENST00000558428 MORC2Q9Y6X9 1032 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-205ENST00000558428 MYH11P35749 1972 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 ENPP3O14638 875 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 SPTLC2O15270 562 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 SLC26A4O43511 780 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 TLL1O43897 1013 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 CSDE1O75534 798 aaKnown RBP13.72□□□□□ -0.21
SMAD3-205ENST00000558428 UPP2O95045 317 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 YEATS4O95619 227 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 CYP11B2P19099 503 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 ARL2P36404 184 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 TMEM119Q4V9L6 283 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 FAM102BQ5T8I3 360 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 GPR153Q6NV75 609 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 FAM117BQ6P1L5 589 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 KCTD17Q8N5Z5 321 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 RNF149Q8NC42 400 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 ASAP3Q8TDY4 903 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 LINC01599Q8WXQ3 324 aa13.72□□□□□ -0.21
SMAD3-205ENST00000558428 TIFAQ96CG3 184 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms