RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 XIRP1Q702N8 1843 aaKnown RBP12.12□□□□□ -0.47
PCAT29-201ENST00000558411 LAMB1P07942 1786 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 SMIM23A6NLE4 172 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 PODXLO00592 558 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 PDHA1P08559 390 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 HSPA6P17066 643 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 CYP7A1P22680 504 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 PSMC4P43686 418 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 MAPK7Q13164 816 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 SPDYAQ5MJ70 313 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 KIF6Q6ZMV9 814 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 VPS36Q86VN1 386 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 FBXO25Q8TCJ0 367 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 FGD4Q96M96 766 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 SERPINB12Q96P63 405 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 SCOCQ9UIL1 159 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 ZMYND8Q9ULU4 1186 aaPredicted RBP12.11□□□□□ -0.47
PCAT29-201ENST00000558411 LRCH1Q9Y2L9 728 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 COL1A1P02452 1464 aaPredicted RBP12.11□□□□□ -0.47
PCAT29-201ENST00000558411 BAZ2AQ9UIF9 1905 aaKnown RBP12.11□□□□□ -0.47
PCAT29-201ENST00000558411 TMEM120BA0PK00 339 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 GFPT2O94808 682 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 AFPP02771 609 aaKnown RBP12.11□□□□□ -0.47
PCAT29-201ENST00000558411 PYGLP06737 847 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 IMPDH2P12268 514 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 GNAQP50148 359 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 MTFR1Q15390 333 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 BARGINQ6ZT62 677 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 KRT25Q7Z3Z0 450 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
PCAT29-201ENST00000558411 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 NUDCD1Q96RS6 583 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 SEMA4AQ9H3S1 761 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 GRHL1Q9NZI5 618 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 LRP2BPQ9P2M1 347 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 PITPNM2Q9BZ72 1349 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 COL18A1P39060 1754 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
PCAT29-201ENST00000558411 A0A1B0GUL6 1792 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 TRAF5O00463 557 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 MAP3K13O43283 966 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 COQ9O75208 318 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 PTDSS1P48651 473 aaKnown RBP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 NT5C2P49902 561 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 GRB10Q13322 594 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 SETDB1Q15047 1291 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 INTS8Q75QN2 995 aaKnown RBP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 TRMT10CQ7L0Y3 403 aaKnown RBP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 ECHDC2Q86YB7 292 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 RBM12BQ8IXT5 1001 aaKnown RBP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 ZC3H3Q8IXZ2 948 aaKnown RBP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 ANKLE1Q8NAG6 615 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 FAM13CQ8NE31 585 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 MAIP1Q8WWC4 291 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 GPKOWQ92917 476 aaPredicted RBP eCLIP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 ZNF333Q96JL9 665 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 MAGEB18Q96M61 343 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 CCDC113Q9H0I3 377 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 DCLRE1BQ9H816 532 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 DMAP1Q9NPF5 467 aaPredicted RBP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 ATP8A2Q9NTI2 1148 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 DLGAP2Q9P1A6 1054 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 USP20Q9Y2K6 914 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 RPS6KL1Q9Y6S9 549 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 NCANO14594 1321 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 BAZ2BQ9UIF8 2168 aaKnown RBP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 ERVV-2B6SEH9 535 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 ECE2O60344 883 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 UPP2O95045 317 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 CHRNA3P32297 505 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 RFC5P40937 340 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 PTGIRP43119 386 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 RASSF2P50749 326 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 MGAT5Q09328 741 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 VSTM1Q6UX27 236 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 MAEAQ7L5Y9 396 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 ARHGAP18Q8N392 663 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 RIOK1Q9BRS2 568 aaKnown RBP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 TIPINQ9BVW5 301 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 TAOK3Q9H2K8 898 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 LMCD1Q9NZU5 365 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 STOML1Q9UBI4 398 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 SEC63Q9UGP8 760 aaKnown RBP12.1□□□□□ -0.47
PCAT29-201ENST00000558411 PCYOX1Q9UHG3 505 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 SNX24Q9Y343 169 aa12.1□□□□□ -0.47
PCAT29-201ENST00000558411 TRAFD1O14545 582 aaPredicted RBP12.09□□□□□ -0.47
PCAT29-201ENST00000558411 NVLO15381 856 aaKnown RBP12.09□□□□□ -0.47
PCAT29-201ENST00000558411 PDE8AO60658 829 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 PHF2O75151 1096 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 SETSIPP0DME0 302 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 VHLP40337 213 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 EPS15P42566 896 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 TECP42680 631 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 YARSP54577 528 aaKnown RBP12.09□□□□□ -0.47
PCAT29-201ENST00000558411 ZRSR2Q15696 482 aaKnown RBP12.09□□□□□ -0.47
PCAT29-201ENST00000558411 MUM1Q2TAK8 710 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 DPY19L2P1Q6NXN4 242 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 TRIM74Q86UV6 250 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms