RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 ATP2B1P20020 1258 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 FGFR4P22455 802 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 NPEPPSP55786 919 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 DRP2Q13474 957 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 TCEAL5Q5H9L2 206 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 FAM102BQ5T8I3 360 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 OTUD6AQ7L8S5 288 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 RHPN2Q8IUC4 686 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 TPH2Q8IWU9 490 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 EXOC8Q8IYI6 725 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 FAM184AQ8NB25 1140 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 RNF169Q8NCN4 708 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 SLC7A3Q8WY07 619 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 TNFRSF25Q93038 417 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 DYDC2Q96IM9 177 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 C8orf76Q96K31 380 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 LLPHQ9BRT6 129 aaKnown RBP13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 LMAN2LQ9H0V9 348 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 NSUN3Q9H649 340 aaKnown RBP13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 UBE2ZQ9H832 354 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 ALG13Q9NP73 1137 aaKnown RBP13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 CYP26B1Q9NR63 512 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 AAASQ9NRG9 546 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 TMEM161AQ9NX61 479 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 RGL1Q9NZL6 768 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 COL4A4P53420 1690 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 EVPLQ92817 2033 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 A0A087WZ62 844 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 NEMFO60524 1076 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 MAFO75444 373 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 CSDE1O75534 798 aaKnown RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 FGFR1P11362 822 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 KCNA5P22460 613 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 TXKP42681 527 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 POLGP54098 1239 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 FAM189BP81408 668 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 ST3GAL1Q11201 340 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 GNL2Q13823 731 aaKnown RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 CTTNQ14247 550 aaKnown RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 DSC3Q14574 896 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 NAALADL2Q58DX5 795 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 C4orf19Q8IY42 314 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 ABI1Q8IZP0 508 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 NLRP4Q96MN2 994 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 CEP89Q96ST8 783 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 FDXACB1Q9BRP7 624 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 LXNQ9BS40 222 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 INO80BQ9C086 356 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 ZSWIM4Q9H7M6 989 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 UPF2Q9HAU5 1272 aaKnown RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 SH2B1Q9NRF2 756 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 PLAGL2Q9UPG8 496 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 PCDHB12Q9Y5F1 795 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 COL4A6Q14031 1691 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 TTC3P53804 2025 aa13.85□□□□□ -0.19
CDC42BPB-202ENST00000558321 IGKV6-21A0A0C4DH24 114 aa13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 LINC00271P0C7V0 271 aa13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 YWHABP31946 246 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 MCM7P33993 719 aa13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 RFC5P40937 340 aa13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 HMGN5P82970 282 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 XKR9Q5GH70 373 aa13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 KSR1Q8IVT5 923 aa13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 KLHL23Q8NBE8 558 aa13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 P2RX5Q93086 422 aa13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 NECAB3Q96P71 396 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 EIF2AK1Q9BQI3 630 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 ELAC1Q9H777 363 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 DACT1Q9NYF0 836 aa13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 WRAP73Q9P2S5 460 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 PPME1Q9Y570 386 aa13.84□□□□□ -0.19
CDC42BPB-202ENST00000558321 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 HOXA2O43364 376 aa13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 SLITRK3O94933 977 aa13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 SFPQP23246 707 aaKnown RBP eCLIP13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 ZNF410Q86VK4 478 aa13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 ECHDC2Q86YB7 292 aa13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 PSPC1Q8WXF1 523 aaKnown RBP13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 TMEM143Q96AN5 459 aa13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 KIF2CQ99661 725 aa13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 IGFLR1Q9H665 355 aa13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 BMP2KQ9NSY1 1161 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 TYW1Q9NV66 732 aaKnown RBP13.83□□□□□ -0.2
CDC42BPB-202ENST00000558321 ZBTB39O15060 712 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 NCK2O43639 380 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 ITGB1P05556 798 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 SRGAP2CP0DJJ0 459 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 RBM25P49756 843 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 SPIRE1Q08AE8 756 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 TWF2Q6IBS0 349 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 CATSPER4Q7RTX7 472 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 THNSL1Q8IYQ7 743 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 SPPL3Q8TCT6 385 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 MICAL1Q8TDZ2 1067 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 POF1BQ8WVV4 589 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms