RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 RCOR1Q9UKL0 485 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 TTC3P53804 2025 aa13.39□□□□□ -0.27
CDK12-203ENST00000558240 GHRP10912 638 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 CYP11B2P19099 503 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 IKBKEQ14164 716 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 MXD4Q14582 209 aaPredicted RBP13.38□□□□□ -0.27
CDK12-203ENST00000558240 ZRSR1Q15695 479 aaKnown RBP13.38□□□□□ -0.27
CDK12-203ENST00000558240 KIZQ2M2Z5 673 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 LRIT3Q3SXY7 679 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 TMEM119Q4V9L6 283 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 ODR4Q5SWX8 454 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 PADI6Q6TGC4 694 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 ZNF410Q86VK4 478 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 MCPH1Q8NEM0 835 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 DBF4BQ8NFT6 615 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 TMEM143Q96AN5 459 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 CLIC6Q96NY7 704 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 BHMT2Q9H2M3 363 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 CDHR5Q9HBB8 845 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 XPNPEP1Q9NQW7 623 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 GINS2Q9Y248 185 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 PTPRSQ13332 1948 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 GBF1Q92538 1859 aa13.38□□□□□ -0.27
CDK12-203ENST00000558240 E9PMD0 336 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 CUTAO60888 179 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 EIF4BP23588 611 aaKnown RBP13.37□□□□□ -0.27
CDK12-203ENST00000558240 ARL2P36404 184 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 TXLNAP40222 546 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 KRT85P78386 507 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 HABP4Q5JVS0 413 aaKnown RBP13.37□□□□□ -0.27
CDK12-203ENST00000558240 KCNK18Q7Z418 384 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 RHPN2Q8IUC4 686 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 PRPF31Q8WWY3 499 aaKnown RBP13.37□□□□□ -0.27
CDK12-203ENST00000558240 NLRP7Q8WX94 980 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 SYMPKQ92797 1274 aaKnown RBP13.37□□□□□ -0.27
CDK12-203ENST00000558240 EPSTI1Q96J88 318 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 OSMRQ99650 979 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 GCOM2Q9BZD3 368 aaPredicted RBP13.37□□□□□ -0.27
CDK12-203ENST00000558240 AGO3Q9H9G7 860 aaKnown RBP13.37□□□□□ -0.27
CDK12-203ENST00000558240 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
CDK12-203ENST00000558240 CXXC1Q9P0U4 656 aaPredicted RBP13.37□□□□□ -0.27
CDK12-203ENST00000558240 CCDC39Q9UFE4 941 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
CDK12-203ENST00000558240 PADI3Q9ULW8 664 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 COL4A3BPQ9Y5P4 624 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 SLC4A7Q9Y6M7 1214 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 MYO9BQ13459 2157 aa13.37□□□□□ -0.27
CDK12-203ENST00000558240 GPR182O15218 404 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 USO1O60763 962 aaKnown RBP13.36□□□□□ -0.27
CDK12-203ENST00000558240 RPS6KA5O75582 802 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 DARSP14868 501 aaKnown RBP13.36□□□□□ -0.27
CDK12-203ENST00000558240 CD52P31358 61 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 POU5F1BQ06416 359 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 LAMTOR4Q0VGL1 99 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 PAK2Q13177 524 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 KARSQ15046 597 aaKnown RBP13.36□□□□□ -0.27
CDK12-203ENST00000558240 TCTN1Q2MV58 587 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 USP49Q70CQ1 688 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
CDK12-203ENST00000558240 PHOSPHO2Q8TCD6 241 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 TMEM40Q8WWA1 233 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 SCLT1Q96NL6 688 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 PPP1R16BQ96T49 567 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 PLIN2Q99541 437 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 FTHL17Q9BXU8 183 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 INO80BQ9C086 356 aaPredicted RBP13.36□□□□□ -0.27
CDK12-203ENST00000558240 KCND2Q9NZV8 630 aa13.36□□□□□ -0.27
CDK12-203ENST00000558240 NOC2LQ9Y3T9 749 aaKnown RBP13.36□□□□□ -0.27
CDK12-203ENST00000558240 A0A087WZ62 844 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.35□□□□□ -0.27
CDK12-203ENST00000558240 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.35□□□□□ -0.27
CDK12-203ENST00000558240 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 PLA2G4BP0C869 781 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 PLCG1P19174 1290 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 ME1P48163 572 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 SLC12A3P55017 1021 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 TFDP1Q14186 410 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 AXDND1Q5T1B0 1012 aaPredicted RBP13.35□□□□□ -0.27
CDK12-203ENST00000558240 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 C1orf186Q6ZWK4 172 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 KSR1Q8IVT5 923 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 RASSF8Q8NHQ8 419 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 SLC9A7Q96T83 725 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 FDXACB1Q9BRP7 624 aaPredicted RBP13.35□□□□□ -0.27
CDK12-203ENST00000558240 TIPINQ9BVW5 301 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 SCAND2PQ9GZW5 306 aaPredicted RBP13.35□□□□□ -0.27
CDK12-203ENST00000558240 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 ERVK-5Q9HDB9 667 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 BLOC1S4Q9NUP1 217 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 PCDHA7Q9UN72 937 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 ST3GAL5Q9UNP4 418 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 SZT2Q5T011 3432 aa13.35□□□□□ -0.27
CDK12-203ENST00000558240 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 NCLP19338 710 aaKnown RBP13.34□□□□□ -0.27
CDK12-203ENST00000558240 GLRA2P23416 452 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 GUCY2CP25092 1073 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 KCNJ6P48051 423 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 WDR5P61964 334 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms