RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 NT5C3AQ9H0P0 336 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 ZEB2O60315 1214 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 UBA7P41226 1012 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 PMS1P54277 932 aaKnown RBP12.75□□□□□ -0.37
RORA-207ENST00000558234 LRRC26Q2I0M4 334 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 RUFY4Q6ZNE9 571 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 CCDC39Q9UFE4 941 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 CYP11B2P19099 503 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 ITGA7Q13683 1181 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 NACC1Q96RE7 527 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 RUSC1Q9BVN2 902 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 HDAC6Q9UBN7 1215 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 HOOK1Q9UJC3 728 aaKnown RBP12.75□□□□□ -0.37
RORA-207ENST00000558234 TBX21Q9UL17 535 aa12.75□□□□□ -0.37
RORA-207ENST00000558234 E9PMD0 336 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 PRCPP42785 496 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 GRIK4Q16099 956 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 ERMNQ8TAM6 284 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 NFKBIZQ9BYH8 718 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 ADAMTS10Q9H324 1103 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 C11orf49Q9H6J7 331 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 RWDD2AQ9UIY3 292 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 B4GALT4O60513 344 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 GPR32O75388 356 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 INSRRP14616 1297 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 HOXD13P35453 343 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 MCM6Q14566 821 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 CDCA2Q69YH5 1023 aaPredicted RBP12.74□□□□□ -0.37
RORA-207ENST00000558234 RINT1Q6NUQ1 792 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 TTI2Q6NXR4 508 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 UNC13DQ70J99 1090 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 DUSP9Q99956 384 aaKnown RBP12.74□□□□□ -0.37
RORA-207ENST00000558234 KCNF1Q9H3M0 494 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 ZNF215Q9UL58 517 aaPredicted RBP12.74□□□□□ -0.37
RORA-207ENST00000558234 KIAA1024Q9UPX6 916 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 ATG2AQ2TAZ0 1938 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 NOP56O00567 594 aaKnown RBP12.74□□□□□ -0.37
RORA-207ENST00000558234 CCT6AP40227 531 aaKnown RBP12.74□□□□□ -0.37
RORA-207ENST00000558234 RFC5P40937 340 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 MYL5Q02045 173 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 CYP4A11Q02928 519 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 FAAP100Q0VG06 881 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 PLA2G4FQ68DD2 849 aa12.74□□□□□ -0.37
RORA-207ENST00000558234 SMIM35A0A1B0GVV1 85 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 CAND2O75155 1236 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 MYL3P08590 195 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 STK4Q13043 487 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
RORA-207ENST00000558234 KRT79Q5XKE5 535 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 CCDC113Q9H0I3 377 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 GDAQ9Y2T3 454 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 PPP1R37O75864 691 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 SMC2O95347 1197 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 ATP1A3P13637 1013 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 ISM2Q6H9L7 571 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 TIPINQ9BVW5 301 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 FGFBP2Q9BYJ0 223 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 NAT10Q9H0A0 1025 aaKnown RBP12.73□□□□□ -0.37
RORA-207ENST00000558234 FNDC1Q4ZHG4 1894 aaPredicted RBP12.73□□□□□ -0.37
RORA-207ENST00000558234 DKC1O60832 514 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■■■■■ 101.2
RORA-207ENST00000558234 TXLNAP40222 546 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 POU5F1BQ06416 359 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 PTK7Q13308 1070 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 DRP2Q13474 957 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 GIT2Q14161 759 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 CENPPQ6IPU0 288 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 SMYD4Q8IYR2 804 aaPredicted RBP12.73□□□□□ -0.37
RORA-207ENST00000558234 KIAA0319LQ8IZA0 1049 aa12.73□□□□□ -0.37
RORA-207ENST00000558234 NTPCRQ9BSD7 190 aaKnown RBP12.73□□□□□ -0.37
RORA-207ENST00000558234 RRN3P2A6NIE6 340 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 KBTBD13C9JR72 458 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 ZNF200P98182 395 aaPredicted RBP12.72□□□□□ -0.37
RORA-207ENST00000558234 SPC25Q9HBM1 224 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 FANCLQ9NW38 375 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 GAS2O43903 313 aaKnown RBP12.72□□□□□ -0.37
RORA-207ENST00000558234 NPEPPSP55786 919 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 BSNDQ8WZ55 320 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 DDX12PQ92771 950 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 ZBTB10Q96DT7 871 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 ST6GALNAC4Q9H4F1 302 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 TREHO43280 583 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 PLA2G4BP0C869 781 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 NR1I3Q14994 352 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 UTP14CQ5TAP6 766 aaKnown RBP12.72□□□□□ -0.37
RORA-207ENST00000558234 SPATA1Q5VX52 437 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 TPH2Q8IWU9 490 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 PIGOQ8TEQ8 1089 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 TRAPPC12Q8WVT3 735 aa12.72□□□□□ -0.37
RORA-207ENST00000558234 A0A1B0GTH6 734 aa12.71□□□□□ -0.37
RORA-207ENST00000558234 KIAA0355O15063 1070 aa12.71□□□□□ -0.37
RORA-207ENST00000558234 BMT2Q1RMZ1 405 aa12.71□□□□□ -0.37
RORA-207ENST00000558234 CALML4Q96GE6 196 aa12.71□□□□□ -0.37
RORA-207ENST00000558234 NAP1L5Q96NT1 182 aaPredicted RBP12.71□□□□□ -0.37
RORA-207ENST00000558234 PLIN2Q99541 437 aa12.71□□□□□ -0.37
RORA-207ENST00000558234 KCTD10Q9H3F6 313 aa12.71□□□□□ -0.37
RORA-207ENST00000558234 SEMA6BQ9H3T3 888 aa12.71□□□□□ -0.37
RORA-207ENST00000558234 RMND1Q9NWS8 449 aa12.71□□□□□ -0.37
RORA-207ENST00000558234 ZMYM2Q9UBW7 1377 aa12.71□□□□□ -0.37
RORA-207ENST00000558234 PSMD2Q13200 908 aa12.71□□□□□ -0.37
RORA-207ENST00000558234 MBTPS1Q14703 1052 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms