RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 PIBF1Q8WXW3 757 aa11.84□□□□□ -0.51
LYSMD2-203ENST00000558126 TMEM87BQ96K49 555 aa11.84□□□□□ -0.51
LYSMD2-203ENST00000558126 RPGRIP1Q96KN7 1286 aa11.84□□□□□ -0.51
LYSMD2-203ENST00000558126 SDF4Q9BRK5 362 aa11.84□□□□□ -0.51
LYSMD2-203ENST00000558126 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
LYSMD2-203ENST00000558126 TMEM161AQ9NX61 479 aa11.84□□□□□ -0.51
LYSMD2-203ENST00000558126 PUF60Q9UHX1 559 aaKnown RBP11.84□□□□□ -0.51
LYSMD2-203ENST00000558126 USP34Q70CQ2 3546 aa11.83□□□□□ -0.51
LYSMD2-203ENST00000558126 ZFHX2Q9C0A1 2572 aaPredicted RBP11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 COL1A2P08123 1366 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 TBKBP1A7MCY6 615 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 MEIS1O00470 390 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 MGEA5O60502 916 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 RPS6KA5O75582 802 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 PLEKHA8P1O95397 391 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 GSPT1P15170 499 aaKnown RBP11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 LAG3P18627 525 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 KLRC1P26715 233 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 MCM5P33992 734 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 ERVFC1P60507 584 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 NFX1Q12986 1120 aaKnown RBP11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 CEP55Q53EZ4 464 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 ZNF484Q5JVG2 852 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 ANKRD54Q6NXT1 300 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 SYCE2Q6PIF2 218 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 CASC1Q6TDU7 716 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 NIPA1Q7RTP0 329 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 UBALD2Q8IYN6 164 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 KIAA0319LQ8IZA0 1049 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 VN1R2Q8NFZ6 395 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 MRPS27Q92552 414 aaKnown RBP11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 ZBTB10Q96DT7 871 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 NECTIN4Q96NY8 510 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 ADAM2Q99965 735 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 CWH43Q9H720 699 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 AGO4Q9HCK5 861 aaKnown RBP11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 ST3GAL5Q9UNP4 418 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 ATG2AQ2TAZ0 1938 aa11.83□□□□□ -0.52
LYSMD2-203ENST00000558126 RIF1Q5UIP0 2472 aaKnown RBP11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 DENND3A2RUS2 1198 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 SH2B2O14492 632 aaPredicted RBP11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 PER2O15055 1255 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 HOXA2O43364 376 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 CSPG5O95196 566 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 ADH1BP00325 375 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 PPM1AP35813 382 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 GATMP50440 423 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 CRYBB1P53674 252 aaPredicted RBP11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 TMEM62Q0P6H9 643 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 FAM102BQ5T8I3 360 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 ABHD15Q6UXT9 468 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 TMTC3Q6ZXV5 915 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 THNSL1Q8IYQ7 743 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 COLGALT1Q8NBJ5 622 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 RSPH1Q8WYR4 309 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 RIPOR3Q96MK2 946 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 TMEM117Q9H0C3 514 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 GLT8D2Q9H1C3 349 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 TYW1Q9NV66 732 aaKnown RBP11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 TMEM260Q9NX78 707 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 NOC2LQ9Y3T9 749 aaKnown RBP11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 PCDHGC5Q9Y5F6 944 aa11.82□□□□□ -0.52
LYSMD2-203ENST00000558126 CCDC69A6NI79 296 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 RNF223E7ERA6 249 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 PRC1O43663 620 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 PPFIA3O75145 1194 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 VCPP55072 806 aaKnown RBP11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 ITIH3Q06033 890 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 ITGB3BPQ13352 177 aaPredicted RBP11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 DSC3Q14574 896 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 UBE2SQ16763 222 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 SPOUT1Q5T280 376 aaKnown RBP11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 FAM160B1Q5W0V3 765 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 SCUBE3Q8IX30 993 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 FANCBQ8NB91 859 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 TRAPPC12Q8WVT3 735 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 TMEM40Q8WWA1 233 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 ATOH1Q92858 354 aaPredicted RBP11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 MYL10Q9BUA6 226 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 ATP6V0A4Q9HBG4 840 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 RIC8AQ9NPQ8 531 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 PKD2L1Q9P0L9 805 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 NR2E1Q9Y466 385 aa11.81□□□□□ -0.52
LYSMD2-203ENST00000558126 CARNS1A5YM72 827 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 ZBTB42B2RXF5 422 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 hCG_1984214I3L0E3 225 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 GPR32O75388 356 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 ARP10275 920 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 SREBF1P36956 1147 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 TECP42680 631 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 GCGRP47871 477 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 KRT17Q04695 432 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 AP3B2Q13367 1082 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 TMEM266Q2M3C6 531 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 TPRNQ4KMQ1 711 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 NFXL1Q6ZNB6 911 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 SGMS1Q86VZ5 419 aa11.8□□□□□ -0.52
LYSMD2-203ENST00000558126 ZNF713Q8N859 430 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms