RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 LAMC2Q13753 1193 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 CCDC40Q4G0X9 1142 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 ZC3H3Q8IXZ2 948 aaKnown RBP22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 C17orf53Q8N3J3 647 aaPredicted RBP22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 KIFAP3Q92845 792 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 CEP63Q96MT8 703 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 POLR3FQ9H1D9 316 aaPredicted RBP22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 GJD2Q9UKL4 321 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 ARID2Q68CP9 1835 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 HTTP42858 3142 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 MYH9P35579 1960 aaKnown RBP22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 TISP43B9A030 160 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 CETN3O15182 167 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 NOGQ13253 232 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 TARBP2Q15633 366 aaKnown RBP22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 DEFB115Q30KQ5 88 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 SYCP3Q8IZU3 236 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 DHX33Q9H6R0 707 aaKnown RBP22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 RRAGDQ9NQL2 400 aaPredicted RBP22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 EMSYQ7Z589 1322 aa22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 HOXC6P09630 235 aa22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 SFPQP23246 707 aaKnown RBP eCLIP22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 CASP4P49662 377 aa22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 NCKAP1LP55160 1127 aa22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 ADKP55263 362 aaKnown RBP22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 PLCB4Q15147 1175 aa22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 CPLX3Q8WVH0 158 aa22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 SLC7A3Q8WY07 619 aa22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 MYH11P35749 1972 aa22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 ZNF236Q9UL36 1845 aa22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 ADGRA3Q8IWK6 1321 aa22.44■■□□□ 1.18
SNRPA1-205ENST00000558036 PLPPR4Q7Z2D5 763 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 TMEM161BQ8NDZ6 487 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 TRAPPC12Q8WVT3 735 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 LENG1Q96BZ8 264 aaPredicted RBP22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 GBP3Q9H0R5 595 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 KMT5AQ9NQR1 393 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 UBE4BO95155 1302 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 AKAP3O75969 853 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 TPM2P07951 284 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 ZNF286BP0CG31 522 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 MAPTP10636 758 aaKnown RBP22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 DRP2Q13474 957 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 DUSP28Q4G0W2 176 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 VWA3BQ502W6 1294 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 ZNF784Q8NCA9 323 aaPredicted RBP22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 ATP8B4Q8TF62 1192 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 AGPAT3Q9NRZ7 376 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 TRPC6Q9Y210 931 aa22.43■■□□□ 1.18
SNRPA1-205ENST00000558036 ZBTB42B2RXF5 422 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 RGS2P41220 211 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 KLK7P49862 253 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 SMTNP53814 917 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 CCZ1BP86790 482 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 CCZ1P86791 482 aaPredicted RBP22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 GTF2BQ00403 316 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 RBL2Q08999 1139 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 TBC1D8BQ0IIM8 1120 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 MAN2A1Q16706 1144 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 HS2ST1Q7LGA3 356 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 CCDC155Q8N6L0 562 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 CCDC150Q8NCX0 1101 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 PPTC7Q8NI37 304 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 BBXQ8WY36 941 aaPredicted RBP22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 ZBTB10Q96DT7 871 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 NDST4Q9H3R1 872 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 RNPEPQ9H4A4 650 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 SMARCAD1Q9H4L7 1026 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 DENND3A2RUS2 1198 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 LGALS2P05162 132 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 CYP2J2P51589 502 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 MSL3Q8N5Y2 521 aaKnown RBP22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 FAM167AQ96KS9 214 aa22.42■■□□□ 1.18
SNRPA1-205ENST00000558036 BRCA2P51587 3418 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 RASSF10A6NK89 507 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 TBC1D8O95759 1140 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 GYPCP04921 128 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 SKILP12757 684 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 PSMC4P43686 418 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 DNM2P50570 870 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 TNFAIP2Q03169 654 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 OR6J1Q8NGC5 347 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 ASAP3Q8TDY4 903 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 SOCS4Q8WXH5 440 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 EMID1Q96A84 441 aaPredicted RBP22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 APBA2Q99767 749 aa22.41■■□□□ 1.18
SNRPA1-205ENST00000558036 RPL13P26373 211 aaKnown RBP22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 SYCP1Q15431 976 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 IQSEC1Q6DN90 963 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 TRIM59Q8IWR1 403 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 TC2NQ8N9U0 490 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 ACCSQ96QU6 501 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 ST6GALNAC4Q9H4F1 302 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 C17orf75Q9HAS0 396 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 CREBZFQ9NS37 354 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 RNF225M0QZC1 329 aaPredicted RBP22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 GNA14O95837 355 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 ZNF865P0CJ78 1059 aaPredicted RBP22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 CASP14P31944 242 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 IRX5P78411 483 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms