RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 DDIT3P35638 169 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 GPC3P51654 580 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 KRT85P78386 507 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 MKRN4PQ13434 485 aaPredicted RBP18.62■□□□□ 0.57
PBX4-202ENST00000557978 LPIN1Q14693 890 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 KIZQ2M2Z5 673 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 RHPN2Q8IUC4 686 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 DBF4BQ8NFT6 615 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 SCLT1Q96NL6 688 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 BHMT2Q9H2M3 363 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 CCDC39Q9UFE4 941 aa18.62■□□□□ 0.57
PBX4-202ENST00000557978 TTC3P53804 2025 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 ABHD14A-ACY1A0A1B0GW23 586 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 USO1O60763 962 aaKnown RBP18.61■□□□□ 0.57
PBX4-202ENST00000557978 GRB10Q13322 594 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 DRP2Q13474 957 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 MXD4Q14582 209 aaPredicted RBP18.61■□□□□ 0.57
PBX4-202ENST00000557978 PADI6Q6TGC4 694 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 ZNF410Q86VK4 478 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 NLRP7Q8WX94 980 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 TMEM143Q96AN5 459 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 CLIC6Q96NY7 704 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 PNMA5Q96PV4 448 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 OSMRQ99650 979 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 INO80BQ9C086 356 aaPredicted RBP18.61■□□□□ 0.57
PBX4-202ENST00000557978 XPNPEP1Q9NQW7 623 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 BMP2KQ9NSY1 1161 aaPredicted RBP18.61■□□□□ 0.57
PBX4-202ENST00000557978 COL4A3BPQ9Y5P4 624 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 LAMA3Q16787 3333 aa18.61■□□□□ 0.57
PBX4-202ENST00000557978 ZBBXA8MT70 800 aa18.6■□□□□ 0.57
PBX4-202ENST00000557978 CUTAO60888 179 aa18.6■□□□□ 0.57
PBX4-202ENST00000557978 RPS6KA5O75582 802 aa18.6■□□□□ 0.57
PBX4-202ENST00000557978 NCLP19338 710 aaKnown RBP18.6■□□□□ 0.57
PBX4-202ENST00000557978 EIF4BP23588 611 aaKnown RBP18.6■□□□□ 0.57
PBX4-202ENST00000557978 RASIP1Q5U651 963 aa18.6■□□□□ 0.57
PBX4-202ENST00000557978 PRPF31Q8WWY3 499 aaKnown RBP18.6■□□□□ 0.57
PBX4-202ENST00000557978 SYMPKQ92797 1274 aaKnown RBP18.6■□□□□ 0.57
PBX4-202ENST00000557978 EPSTI1Q96J88 318 aa18.6■□□□□ 0.57
PBX4-202ENST00000557978 PPP1R16BQ96T49 567 aa18.6■□□□□ 0.57
PBX4-202ENST00000557978 FTHL17Q9BXU8 183 aa18.6■□□□□ 0.57
PBX4-202ENST00000557978 GCOM2Q9BZD3 368 aaPredicted RBP18.6■□□□□ 0.57
PBX4-202ENST00000557978 ADAMTS10Q9H324 1103 aa18.6■□□□□ 0.57
PBX4-202ENST00000557978 CDHR5Q9HBB8 845 aa18.6■□□□□ 0.57
PBX4-202ENST00000557978 RCOR1Q9UKL0 485 aa18.6■□□□□ 0.57
PBX4-202ENST00000557978 CIZ1Q9ULV3 898 aaPredicted RBP18.6■□□□□ 0.57
PBX4-202ENST00000557978 MYO9BQ13459 2157 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 GPR182O15218 404 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 CYP11B2P19099 503 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 KCNJ6P48051 423 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 PAK2Q13177 524 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 KARSQ15046 597 aaKnown RBP18.59■□□□□ 0.57
PBX4-202ENST00000557978 LRIT3Q3SXY7 679 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 TMEM119Q4V9L6 283 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 SPECC1Q5M775 1068 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 SPATA32Q96LK8 384 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 PLIN2Q99541 437 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 SCAND2PQ9GZW5 306 aaPredicted RBP18.59■□□□□ 0.57
PBX4-202ENST00000557978 PADI3Q9ULW8 664 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 SLC4A7Q9Y6M7 1214 aa18.59■□□□□ 0.57
PBX4-202ENST00000557978 A0A087WZ62 844 aa18.58■□□□□ 0.57
PBX4-202ENST00000557978 CD52P31358 61 aa18.58■□□□□ 0.57
PBX4-202ENST00000557978 ME1P48163 572 aa18.58■□□□□ 0.57
PBX4-202ENST00000557978 LAMTOR4Q0VGL1 99 aa18.58■□□□□ 0.57
PBX4-202ENST00000557978 TFDP1Q14186 410 aa18.58■□□□□ 0.57
PBX4-202ENST00000557978 KCNK18Q7Z418 384 aa18.58■□□□□ 0.57
PBX4-202ENST00000557978 SYT2Q8N9I0 419 aaPredicted RBP18.58■□□□□ 0.57
PBX4-202ENST00000557978 FDXACB1Q9BRP7 624 aaPredicted RBP18.58■□□□□ 0.57
PBX4-202ENST00000557978 OSBPL7Q9BZF2 842 aa18.58■□□□□ 0.57
PBX4-202ENST00000557978 AGO3Q9H9G7 860 aaKnown RBP18.58■□□□□ 0.57
PBX4-202ENST00000557978 KCND2Q9NZV8 630 aa18.58■□□□□ 0.57
PBX4-202ENST00000557978 NOC2LQ9Y3T9 749 aaKnown RBP18.58■□□□□ 0.57
PBX4-202ENST00000557978 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.57■□□□□ 0.56
PBX4-202ENST00000557978 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.57■□□□□ 0.56
PBX4-202ENST00000557978 DARSP14868 501 aaKnown RBP18.57■□□□□ 0.56
PBX4-202ENST00000557978 PLCG1P19174 1290 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 ARL2P36404 184 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 POU5F1BQ06416 359 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 NFX1Q12986 1120 aaKnown RBP18.57■□□□□ 0.56
PBX4-202ENST00000557978 HABP4Q5JVS0 413 aaKnown RBP18.57■□□□□ 0.56
PBX4-202ENST00000557978 FAM102BQ5T8I3 360 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 CCDC73Q6ZRK6 1079 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 USP49Q70CQ1 688 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 PHOSPHO2Q8TCD6 241 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 TMEM40Q8WWA1 233 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 NLRP4Q96MN2 994 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 SLC9A7Q96T83 725 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 TIPINQ9BVW5 301 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 CXXC1Q9P0U4 656 aaPredicted RBP18.57■□□□□ 0.56
PBX4-202ENST00000557978 PCDHA7Q9UN72 937 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 SSBP05455 408 aaKnown RBP eCLIP18.57■□□□□ 0.56
PBX4-202ENST00000557978 PLA2G4BP0C869 781 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 SRGAP2CP0DJJ0 459 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 RRAGBQ5VZM2 374 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 RINT1Q6NUQ1 792 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 MAEAQ7L5Y9 396 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 SRGAP1Q7Z6B7 1085 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 KSR1Q8IVT5 923 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 RNF149Q8NC42 400 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 KIFAP3Q92845 792 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 ZNF668Q96K58 619 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms