RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 RAPGEFL1Q9UHV5 662 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 LOXHD1Q8IVV2 1947 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 LINC01565O15544 149 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 SLC37A4O43826 429 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 PFKFB2O60825 505 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 TBX10O75333 385 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 FGF18O76093 207 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 GCFC2P16383 781 aaKnown RBP16.45■□□□□ 0.22
SHMT2-235ENST00000557740 IRS1P35568 1242 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 NRIP1P48552 1158 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 DNM2P50570 870 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 FAM189BP81408 668 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 UBE3AQ05086 875 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 SMAD4Q13485 552 aaKnown RBP16.45■□□□□ 0.22
SHMT2-235ENST00000557740 ANKRD1Q15327 319 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 TARBP2Q15633 366 aaKnown RBP16.45■□□□□ 0.22
SHMT2-235ENST00000557740 ADGRD2Q7Z7M1 963 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 NEK8Q86SG6 692 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 RNF169Q8NCN4 708 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 LRFN3Q9BTN0 628 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 PHF20Q9BVI0 1012 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 HCSTQ9UBK5 93 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 CD207Q9UJ71 328 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 TPCN1Q9ULQ1 816 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 EVPLQ92817 2033 aa16.45■□□□□ 0.22
SHMT2-235ENST00000557740 TMEM150BA6NC51 233 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 DDX11L8A8MPP1 907 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 PI4K2BG5E9Z4 385 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 ANAPC15P60006 121 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 PSMC5P62195 406 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 CDC42EP1Q00587 391 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 ZP2Q05996 745 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 DLX2Q07687 328 aaPredicted RBP16.44■□□□□ 0.22
SHMT2-235ENST00000557740 ADAM15Q13444 863 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 B3GNT9Q6UX72 402 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 RBM23Q86U06 439 aaKnown RBP16.44■□□□□ 0.22
SHMT2-235ENST00000557740 ADHFE1Q8IWW8 467 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 LRRC43Q8N309 656 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 EFHBQ8N7U6 833 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 WASF1Q92558 559 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 POP1Q99575 1024 aaKnown RBP16.44■□□□□ 0.22
SHMT2-235ENST00000557740 NIFKQ9BYG3 293 aaKnown RBP16.44■□□□□ 0.22
SHMT2-235ENST00000557740 GCOM2Q9BZD3 368 aaPredicted RBP16.44■□□□□ 0.22
SHMT2-235ENST00000557740 TLR9Q9NR96 1032 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 PPP4R2Q9NY27 417 aa16.44■□□□□ 0.22
SHMT2-235ENST00000557740 KIAA1671Q9BY89 1806 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 FAM86C2PA6NEL3 165 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 MBTPS2O43462 519 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 MARCH6O60337 910 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 GPR37L1O60883 481 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 FGFR4P22455 802 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 SFPQP23246 707 aaKnown RBP eCLIP16.43■□□□□ 0.22
SHMT2-235ENST00000557740 SMAD2Q15796 467 aaKnown RBP16.43■□□□□ 0.22
SHMT2-235ENST00000557740 PIK3AP1Q6ZUJ8 805 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 ECHDC2Q86YB7 292 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 FAM20AQ96MK3 541 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 NAP1L4Q99733 375 aaKnown RBP16.43■□□□□ 0.22
SHMT2-235ENST00000557740 JPH2Q9BR39 696 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-235ENST00000557740 SH2D3AQ9BRG2 576 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 TLE6Q9H808 572 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 BRMS1Q9HCU9 246 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 DACT1Q9NYF0 836 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 HCN4Q9Y3Q4 1203 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 PCDHGC5Q9Y5F6 944 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 ATG2AQ2TAZ0 1938 aa16.43■□□□□ 0.22
SHMT2-235ENST00000557740 FSD2A1L4K1 749 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 CCNT1O60563 726 aaKnown RBP16.42■□□□□ 0.22
SHMT2-235ENST00000557740 DKC1O60832 514 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHMT2-235ENST00000557740 ALADP13716 330 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 PPM1AP35813 382 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 AK2P54819 239 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 PPP2R5CQ13362 524 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 DRP2Q13474 957 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 PPP4R3AQ6IN85 833 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 PDE12Q6L8Q7 609 aaKnown RBP16.42■□□□□ 0.22
SHMT2-235ENST00000557740 ZNF410Q86VK4 478 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 ZNF558Q96NG5 402 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 CASD1Q96PB1 797 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 CWH43Q9H720 699 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 KCNMB3Q9NPA1 279 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 SUCLA2Q9P2R7 463 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-235ENST00000557740 ORC3Q9UBD5 711 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-235ENST00000557740 VAV3Q9UKW4 847 aa16.42■□□□□ 0.22
SHMT2-235ENST00000557740 IGKV6-21A0A0C4DH24 114 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 DCXO43602 365 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 CSDE1O75534 798 aaKnown RBP16.41■□□□□ 0.22
SHMT2-235ENST00000557740 STBD1O95210 358 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 QARSP47897 775 aaKnown RBP16.41■□□□□ 0.22
SHMT2-235ENST00000557740 PLA2G4FQ68DD2 849 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 ANO5Q75V66 913 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 RHPN2Q8IUC4 686 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 OXER1Q8TDS5 423 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 MSLNLQ96KJ4 702 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 CDCA3Q99618 268 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-235ENST00000557740 INO80BQ9C086 356 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-235ENST00000557740 C11orf16Q9NQ32 467 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 ENTPD7Q9NQZ7 604 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 CHST12Q9NRB3 414 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 RNF19AQ9NV58 838 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 PUF60Q9UHX1 559 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms