RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MOXD1Q6UVY6 613 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 B3GNT9Q6UX72 402 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 RBM23Q86U06 439 aaKnown RBP17.9■□□□□ 0.46
TUBB3-213ENST00000557262 COLGALT1Q8NBJ5 622 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 MBOAT7Q96N66 472 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 NIFKQ9BYG3 293 aaKnown RBP17.9■□□□□ 0.46
TUBB3-213ENST00000557262 TMEM117Q9H0C3 514 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 HOXA2O43364 376 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 DARSP14868 501 aaKnown RBP17.89■□□□□ 0.45
TUBB3-213ENST00000557262 GPC3P51654 580 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 NONOQ15233 471 aaKnown RBP eCLIP17.89■□□□□ 0.45
TUBB3-213ENST00000557262 NPY5RQ15761 445 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 PDE12Q6L8Q7 609 aaKnown RBP17.89■□□□□ 0.45
TUBB3-213ENST00000557262 THNSL1Q8IYQ7 743 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 FAM122AQ96E09 287 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 ZNF668Q96K58 619 aaPredicted RBP17.89■□□□□ 0.45
TUBB3-213ENST00000557262 MSLNLQ96KJ4 702 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 AIFM3Q96NN9 605 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 CWH43Q9H720 699 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 TLE6Q9H808 572 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 HCN4Q9Y3Q4 1203 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 C5orf42Q9H799 3197 aa17.89■□□□□ 0.45
TUBB3-213ENST00000557262 KIAA1671Q9BY89 1806 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 PRR33A8MZF0 331 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 DCXO43602 365 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 STBD1O95210 358 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 EYA4O95677 639 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 LAG3P18627 525 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 PLA2G5P39877 138 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 DNM2P50570 870 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 KRT25Q7Z3Z0 450 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 ECHDC2Q86YB7 292 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 ETNPPLQ8TBG4 499 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 SCLT1Q96NL6 688 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 CASD1Q96PB1 797 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 POP1Q99575 1024 aaKnown RBP17.88■□□□□ 0.45
TUBB3-213ENST00000557262 TLR9Q9NR96 1032 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 CLEC1BQ9P126 229 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 HCSTQ9UBK5 93 aa17.88■□□□□ 0.45
TUBB3-213ENST00000557262 DDX25Q9UHL0 483 aaKnown RBP17.88■□□□□ 0.45
TUBB3-213ENST00000557262 FNDC1Q4ZHG4 1894 aaPredicted RBP17.88■□□□□ 0.45
TUBB3-213ENST00000557262 DDX11L8A8MPP1 907 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 CDKL5O76039 1030 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 EOMESO95936 686 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 ERVFC1P60507 584 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 PLCB3Q01970 1234 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 COASYQ13057 564 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 INF2Q27J81 1249 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 MTERF2Q49AM1 385 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 LRRC55Q6ZSA7 311 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 ABI1Q8IZP0 508 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 NLRP7Q8WX94 980 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 CEP89Q96ST8 783 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 GCOM2Q9BZD3 368 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-213ENST00000557262 RNF19AQ9NV58 838 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 SEPT9Q9UHD8 586 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-213ENST00000557262 PUF60Q9UHX1 559 aaKnown RBP17.87■□□□□ 0.45
TUBB3-213ENST00000557262 KCNJ14Q9UNX9 436 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 LZTS1Q9Y250 596 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 PCDHGC5Q9Y5F6 944 aa17.87■□□□□ 0.45
TUBB3-213ENST00000557262 WDR81Q562E7 1941 aa17.86■□□□□ 0.45
TUBB3-213ENST00000557262 IGKV6-21A0A0C4DH24 114 aa17.86■□□□□ 0.45
TUBB3-213ENST00000557262 A0A0U1RQF3 1178 aa17.86■□□□□ 0.45
TUBB3-213ENST00000557262 PER2O15055 1255 aa17.86■□□□□ 0.45
TUBB3-213ENST00000557262 XBP1P17861 261 aa17.86■□□□□ 0.45
TUBB3-213ENST00000557262 SCRN1Q12765 414 aa17.86■□□□□ 0.45
TUBB3-213ENST00000557262 DRP2Q13474 957 aa17.86■□□□□ 0.45
TUBB3-213ENST00000557262 MRPS27Q92552 414 aaKnown RBP17.86■□□□□ 0.45
TUBB3-213ENST00000557262 PHF20Q9BVI0 1012 aa17.86■□□□□ 0.45
TUBB3-213ENST00000557262 SLKQ9H2G2 1235 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-213ENST00000557262 CHST12Q9NRB3 414 aa17.86■□□□□ 0.45
TUBB3-213ENST00000557262 DACT1Q9NYF0 836 aa17.86■□□□□ 0.45
TUBB3-213ENST00000557262 CCDC194A0A1B0GVG4 234 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 FSD2A1L4K1 749 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 FSCN2O14926 492 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 MAFO75444 373 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-213ENST00000557262 FGFR4P22455 802 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 PSMC5P62195 406 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 LETM2Q2VYF4 491 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 KCNT2Q6UVM3 1135 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 RNF169Q8NCN4 708 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 SMRP1Q8NCR6 262 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 FAM20AQ96MK3 541 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 ZNF558Q96NG5 402 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 CDCA3Q99618 268 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-213ENST00000557262 SH2D3AQ9BRG2 576 aa17.85■□□□□ 0.45
TUBB3-213ENST00000557262 INO80BQ9C086 356 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-213ENST00000557262 TMEM150BA6NC51 233 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 SLC37A4O43826 429 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 PFKFB2O60825 505 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 CSDE1O75534 798 aaKnown RBP17.84■□□□□ 0.45
TUBB3-213ENST00000557262 GLP2RO95838 553 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 KRT17Q04695 432 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 PPP2R5CQ13362 524 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 DUSP6Q16828 381 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 PPP4R3AQ6IN85 833 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 ANO5Q75V66 913 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 NEK8Q86SG6 692 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 ZNF598Q86UK7 904 aaKnown RBP17.84■□□□□ 0.45
TUBB3-213ENST00000557262 LRRC43Q8N309 656 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms