RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 ZDHHC18Q9NUE0 388 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 SPATS2LQ9NUQ6 558 aaKnown RBP13.62□□□□□ -0.23
APEX1-216ENST00000557159 NAGPAQ9UK23 515 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.62□□□□□ -0.23
APEX1-216ENST00000557159 GPR75-ASB3A0A0A6YYF3 556 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 KLHL33A6NCF5 533 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
APEX1-216ENST00000557159 CCNT1O60563 726 aaKnown RBP13.62□□□□□ -0.23
APEX1-216ENST00000557159 CAND2O75155 1236 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 PRELPP51888 382 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 RAPGEF1Q13905 1077 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 DPY19L2P1Q6NXN4 242 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 HPS3Q969F9 1004 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 IFT74Q96LB3 600 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.62□□□□□ -0.23
APEX1-216ENST00000557159 SLC5A4Q9NY91 659 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 AMACRQ9UHK6 382 aa13.62□□□□□ -0.23
APEX1-216ENST00000557159 CYTH3O43739 400 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 SNX3O60493 162 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 TECP42680 631 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 TFAP4Q01664 338 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 BLMHQ13867 455 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 TMEM266Q2M3C6 531 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 SLC35G1Q2M3R5 365 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 NAIF1Q69YI7 327 aaPredicted RBP13.61□□□□□ -0.23
APEX1-216ENST00000557159 MFSD5Q6N075 450 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 MIS18BP1Q6P0N0 1132 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 PEX26Q7Z412 305 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 NT5DC3Q86UY8 548 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 TEX9Q8N6V9 391 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 AGAP11Q8TF27 550 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 SAAL1Q96ER3 474 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 ERP44Q9BS26 406 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 PNMA2Q9UL42 364 aa13.61□□□□□ -0.23
APEX1-216ENST00000557159 TRAF5O00463 557 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 RIMBP2O15034 1052 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 TTI1O43156 1089 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 RPSAP08865 295 aaKnown RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 RARAP10276 462 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 HSPA6P17066 643 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 BRD2P25440 801 aaKnown RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 CCNHP51946 323 aaPredicted RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 RNASE9P60153 205 aaKnown RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 NCALDP61601 193 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 PTK2Q05397 1052 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 BNIP1Q12981 228 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 AOC3Q16853 763 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 LETM2Q2VYF4 491 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 FAM47AQ5JRC9 791 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 HYIQ5T013 277 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 CAPRIN2Q6IMN6 1127 aaKnown RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 ALKBH5Q6P6C2 394 aaKnown RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 HEATR3Q7Z4Q2 680 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 VPS36Q86VN1 386 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 EGFL6Q8IUX8 553 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 LRRC34Q8IZ02 419 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 FAM133AQ8N9E0 248 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 CFAP61Q8NHU2 1237 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 SH3RF3Q8TEJ3 882 aaPredicted RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 DDX12PQ92771 950 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 DNAJC19Q96DA6 116 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 CDK5RAP3Q96JB5 506 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 CARD9Q9H257 536 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 ARHGEF3Q9NR81 526 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 INTS9Q9NV88 658 aaKnown RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 PARP2Q9UGN5 583 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 E7ENQ6 273 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 CLTAP09496 248 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 TSPY3P0CV98 308 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 TSPY8P0CW00 308 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 LMNB1P20700 586 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 DNA2P51530 1060 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 PMS2P54278 862 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 SARNPP82979 210 aaKnown RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 KLRC3Q07444 240 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 DENND2CQ68D51 928 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 TAOK1Q7L7X3 1001 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 ZNF571Q7Z3V5 609 aaPredicted RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 MDM1Q8TC05 714 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 TBC1D31Q96DN5 1066 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 SPDL1Q96EA4 605 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 AP1M1Q9BXS5 423 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 ROPN1BQ9BZX4 212 aaPredicted RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 ROPN1Q9HAT0 212 aaPredicted RBP13.6□□□□□ -0.23
APEX1-216ENST00000557159 IL17RBQ9NRM6 502 aa13.6□□□□□ -0.23
APEX1-216ENST00000557159 NCANO14594 1321 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 A6NHS1 94 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 H2AFZP0C0S5 128 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 GCKP35557 465 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 COASYQ13057 564 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 NBPF20Q3BBV1 942 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 CCDC38Q502W7 563 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 FAM26FQ5R3K3 315 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 H2AFVQ71UI9 128 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 ASRGL1Q7L266 308 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 FRMD5Q7Z6J6 570 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 LARGE2Q8N3Y3 721 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 ZNF570Q96NI8 536 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 COA1Q9GZY4 146 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms