RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 MFSD4AQ8N468 514 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 ANKRD44Q8N8A2 993 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 MFSD2AQ8NA29 543 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 SHCBP1Q8NEM2 672 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 KLHDC4Q8TBB5 520 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 ZSCAN18Q8TBC5 510 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-223ENST00000557076 LIN37Q96GY3 246 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-223ENST00000557076 UIMC1Q96RL1 719 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 CARS2Q9HA77 564 aaKnown RBP5.8□□□□□ -1.48
SCFD1-223ENST00000557076 IL23AQ9NPF7 189 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 XPNPEP3Q9NQH7 507 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 SEMA3GQ9NS98 782 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 PLXNB2O15031 1838 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 SPTBN4Q9H254 2564 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 MROH7-TTC4A0A0A0MT08 1334 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 PDS5AQ29RF7 1337 aaKnown RBP5.79□□□□□ -1.48
SCFD1-223ENST00000557076 MROH7Q68CQ1 1323 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 CACNA1HO95180 2353 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 SPEF2Q9C093 1822 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 BRWD1Q9NSI6 2320 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 SLITRK5O94991 958 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 GDNFP39905 211 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 PHKA1P46020 1223 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 USP14P54578 494 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 GSTO1P78417 241 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 COG2Q14746 738 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 KCNA10Q16322 511 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 FYB2Q5VWT5 728 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 PCNX4Q63HM2 1172 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 ALG1LQ6GMV1 187 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 KLHDC9Q8NEP7 349 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 MAML3Q96JK9 1138 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 HSPA12BQ96MM6 686 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 MOV10L1Q9BXT6 1211 aaKnown RBP5.79□□□□□ -1.48
SCFD1-223ENST00000557076 KIAA1683Q9H0B3 1180 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 MROH8Q9H579 483 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 STARD7Q9NQZ5 370 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 ABCF2Q9UG63 623 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 TPX2Q9ULW0 747 aaKnown RBP5.79□□□□□ -1.48
SCFD1-223ENST00000557076 DIS3Q9Y2L1 958 aaKnown RBP5.79□□□□□ -1.48
SCFD1-223ENST00000557076 SLC4A7Q9Y6M7 1214 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 RLFQ13129 1914 aa5.79□□□□□ -1.48
SCFD1-223ENST00000557076 LTBP2Q14767 1821 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 IL16Q14005 1332 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-223ENST00000557076 PRAMEF27A3QJZ7 478 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 ARVCFO00192 962 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 FBXO24O75426 580 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 CIAO1O76071 339 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 CD4P01730 458 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 ERCC3P19447 782 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 MAPK8P45983 427 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 RFX5P48382 616 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-223ENST00000557076 RABGGTBP53611 331 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 RASGRF1Q13972 1273 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 ATP2B3Q16720 1220 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 SLC4A10Q6U841 1118 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 SYDE1Q6ZW31 735 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-223ENST00000557076 HDXQ7Z353 690 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 THAP5Q7Z6K1 395 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 CILP2Q8IUL8 1156 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 FAM178BQ8IXR5 827 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 RPUSD2Q8IZ73 545 aaKnown RBP5.78□□□□□ -1.48
SCFD1-223ENST00000557076 MB21D1Q8N884 522 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 ZNF384Q8TF68 577 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 NSUN4Q96CB9 384 aaKnown RBP5.78□□□□□ -1.48
SCFD1-223ENST00000557076 COX4I2Q96KJ9 171 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 GLT1D1Q96MS3 346 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 MIPEPQ99797 713 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 SPATC1LQ9H0A9 340 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 ATP13A1Q9HD20 1204 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 ZBTB21Q9ULJ3 1066 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 PTPRFP10586 1907 aa5.78□□□□□ -1.48
SCFD1-223ENST00000557076 SMCHD1A6NHR9 2005 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 PHIPQ8WWQ0 1821 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 RFXAPO00287 272 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 DUSP11O75319 330 aaKnown RBP5.77□□□□□ -1.49
SCFD1-223ENST00000557076 BAG3O95817 575 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 FCER1AP12319 257 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 AKR1A1P14550 325 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 MYOGP15173 224 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 ATP2A2P16615 1042 aaKnown RBP5.77□□□□□ -1.49
SCFD1-223ENST00000557076 VCAM1P19320 739 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 CST5P28325 142 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-223ENST00000557076 CYP2C18P33260 490 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 SLBPQ14493 270 aaKnown RBP eCLIP5.77□□□□□ -1.49
SCFD1-223ENST00000557076 LEXMQ3ZCV2 418 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 CDKAL1Q5VV42 579 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 TATDN1Q6P1N9 297 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 LRFN4Q6PJG9 635 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 ATF7IPQ6VMQ6 1270 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 OTOP2Q7RTS6 562 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 FAM126BQ8IXS8 530 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 TEX11Q8IYF3 940 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 MSL3Q8N5Y2 521 aaKnown RBP5.77□□□□□ -1.49
SCFD1-223ENST00000557076 PCSK9Q8NBP7 692 aaKnown RBP5.77□□□□□ -1.49
SCFD1-223ENST00000557076 FBXO15Q8NCQ5 510 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-223ENST00000557076 TINF2Q9BSI4 451 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 SEZ6LQ9BYH1 1024 aa5.77□□□□□ -1.49
SCFD1-223ENST00000557076 OSBPL7Q9BZF2 842 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms