RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 BLOC1S2Q6QNY1 142 aa20.68■□□□□ 0.9
VIPAS39-209ENST00000556909 TRIM67Q6ZTA4 783 aa20.68■□□□□ 0.9
VIPAS39-209ENST00000556909 BMP8AQ7Z5Y6 402 aa20.68■□□□□ 0.9
VIPAS39-209ENST00000556909 CCDC148Q8NFR7 591 aa20.68■□□□□ 0.9
VIPAS39-209ENST00000556909 BICD2Q8TD16 824 aa20.68■□□□□ 0.9
VIPAS39-209ENST00000556909 RPGRIP1Q96KN7 1286 aa20.68■□□□□ 0.9
VIPAS39-209ENST00000556909 TCF25Q9BQ70 676 aa20.68■□□□□ 0.9
VIPAS39-209ENST00000556909 DISC1Q9NRI5 854 aa20.68■□□□□ 0.9
VIPAS39-209ENST00000556909 SNX14Q9Y5W7 946 aa20.68■□□□□ 0.9
VIPAS39-209ENST00000556909 MSH4O15457 936 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 EDIL3O43854 480 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 SRGAP2BP0DMP2 458 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 TMOD1P28289 359 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 HSPA4P34932 840 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 PBX3P40426 434 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 GPC3P51654 580 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 ZXDAP98168 799 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 AKAP17AQ02040 695 aaKnown RBP20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 UGCGQ16739 394 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 KCNT2Q6UVM3 1135 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 TMEM184AQ6ZMB5 413 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 ECHDC2Q86YB7 292 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 FBXL16Q8N461 479 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 ZNF668Q96K58 619 aaPredicted RBP20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 RNF26Q9BY78 433 aaPredicted RBP20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 AGXT2Q9BYV1 514 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 ENTPD7Q9NQZ7 604 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 VPS54Q9P1Q0 977 aa20.67■□□□□ 0.9
VIPAS39-209ENST00000556909 HIDE1A8MVS5 230 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 CHMP2AO43633 222 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 ZSCAN20P17040 1043 aaPredicted RBP20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 RPS6KB1P23443 525 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 PPM1AP35813 382 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 CLLU1OSQ5K130 101 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 ABI1Q8IZP0 508 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 ZNF710Q8N1W2 664 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 CCDC136Q96JN2 1154 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 ZNF558Q96NG5 402 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 SLC26A6Q9BXS9 759 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 NRBP2Q9NSY0 501 aa20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 PUF60Q9UHX1 559 aaKnown RBP20.66■□□□□ 0.9
VIPAS39-209ENST00000556909 GAS7O60861 476 aa20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 DARSP14868 501 aaKnown RBP20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 TECP42680 631 aa20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 ANKRD54Q6NXT1 300 aa20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 RNF169Q8NCN4 708 aa20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 SLC5A5Q92911 643 aa20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 PBXIP1Q96AQ6 731 aa20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 RIT2Q99578 217 aa20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 S1PR5Q9H228 398 aa20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 UNC45AQ9H3U1 944 aa20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 NGRNQ9NPE2 291 aaKnown RBP20.65■□□□□ 0.9
VIPAS39-209ENST00000556909 IFNAR1P17181 557 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 FGFR4P22455 802 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 SFNP31947 248 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 USP11P51784 963 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 JAK3P52333 1124 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 TBC1D8BQ0IIM8 1120 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 LRCH2Q5VUJ6 765 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 LLGL2Q6P1M3 1020 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 SYCE2Q6PIF2 218 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 ZNF598Q86UK7 904 aaKnown RBP20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 PRSS33Q8NF86 280 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 GJA10Q969M2 543 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 SCLT1Q96NL6 688 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 TEKT3Q9BXF9 490 aa20.64■□□□□ 0.89
VIPAS39-209ENST00000556909 A0A0U1RQF3 1178 aa20.63■□□□□ 0.89
VIPAS39-209ENST00000556909 KRT17Q04695 432 aa20.63■□□□□ 0.89
VIPAS39-209ENST00000556909 DRP2Q13474 957 aa20.63■□□□□ 0.89
VIPAS39-209ENST00000556909 TARBP2Q15633 366 aaKnown RBP20.63■□□□□ 0.89
VIPAS39-209ENST00000556909 SLC39A11Q8N1S5 342 aa20.63■□□□□ 0.89
VIPAS39-209ENST00000556909 HELQQ8TDG4 1101 aa20.63■□□□□ 0.89
VIPAS39-209ENST00000556909 NLRP7Q8WX94 980 aa20.63■□□□□ 0.89
VIPAS39-209ENST00000556909 APOL5Q9BWW9 433 aa20.63■□□□□ 0.89
VIPAS39-209ENST00000556909 NCOA5Q9HCD5 579 aaKnown RBP20.63■□□□□ 0.89
VIPAS39-209ENST00000556909 SPG21Q9NZD8 308 aa20.63■□□□□ 0.89
VIPAS39-209ENST00000556909 CCT2P78371 535 aaKnown RBP20.62■□□□□ 0.89
VIPAS39-209ENST00000556909 SIGLEC14Q08ET2 396 aa20.62■□□□□ 0.89
VIPAS39-209ENST00000556909 IER5LQ5T953 404 aa20.62■□□□□ 0.89
VIPAS39-209ENST00000556909 TMC7Q7Z402 723 aa20.62■□□□□ 0.89
VIPAS39-209ENST00000556909 SUGP1Q8IWZ8 645 aaKnown RBP20.62■□□□□ 0.89
VIPAS39-209ENST00000556909 TBCKQ8TEA7 893 aa20.62■□□□□ 0.89
VIPAS39-209ENST00000556909 SH3GLB2Q9NR46 395 aa20.62■□□□□ 0.89
VIPAS39-209ENST00000556909 SEPT9Q9UHD8 586 aaPredicted RBP20.62■□□□□ 0.89
VIPAS39-209ENST00000556909 CSDE1O75534 798 aaKnown RBP20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 PSMD10O75832 226 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 EOMESO95936 686 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 HOXB8P17481 243 aaPredicted RBP20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 PDIA3P30101 505 aaKnown RBP20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 EVCP57679 992 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 NLRP5P59047 1200 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 SMC1AQ14683 1233 aaKnown RBP20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 PTPN21Q16825 1174 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 Q4G0T1 1027 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 FBXL6Q8N531 539 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 RDM1Q8NG50 284 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 ASIC4Q96FT7 647 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 CEP89Q96ST8 783 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 MRPL9Q9BYD2 267 aaKnown RBP20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 DACT1Q9NYF0 836 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms