RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 AOAHP28039 575 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 MRE11P49959 708 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 CD83Q01151 205 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 GRM7Q14831 915 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 GPR19Q15760 415 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 TRIM61Q5EBN2 209 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 CCDC181Q5TID7 509 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 Q6ZPA2 131 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 DDX46Q7L014 1031 aaKnown RBP5.88□□□□□ -1.47
PRPF39-210ENST00000556718 CXXC5Q7LFL8 322 aaKnown RBP5.88□□□□□ -1.47
PRPF39-210ENST00000556718 MAMDC2Q7Z304 686 aaPredicted RBP5.88□□□□□ -1.47
PRPF39-210ENST00000556718 NLGN4XQ8N0W4 816 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 PTPRN2Q92932 1015 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 ZG16BQ96DA0 208 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 CLUHP3Q96NS8 147 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 CBLCQ9ULV8 474 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 ATP23Q9Y6H3 246 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 PRAMEF25A6NGN4 478 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 GSG1L2A8MUP6 293 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 B4E1Z4 1266 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 KCNQ2O43526 872 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 ASLP04424 464 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 PYGMP11217 842 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 MAKP20794 623 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 NEK4P51957 841 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 JAM2P57087 298 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 HGFACQ04756 655 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 PAK1Q13153 545 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 KANK2Q63ZY3 851 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 UBE2R2Q712K3 238 aaPredicted RBP5.87□□□□□ -1.47
PRPF39-210ENST00000556718 OTOP2Q7RTS6 562 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 D2HGDHQ8N465 521 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 MAGEB10Q96LZ2 347 aaPredicted RBP5.87□□□□□ -1.47
PRPF39-210ENST00000556718 TARS2Q9BW92 718 aaKnown RBP5.87□□□□□ -1.47
PRPF39-210ENST00000556718 OR10A2Q9H208 303 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 CATSPERZQ9NTU4 200 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 FBXO10Q9UK96 956 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 GIT1Q9Y2X7 761 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 PCDHA8Q9Y5H6 950 aa5.87□□□□□ -1.47
PRPF39-210ENST00000556718 CAPN14A8MX76 684 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 AQP7O14520 342 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 NPTXRO95502 500 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 SDSP20132 328 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 GJA4P35212 333 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 IGFALSP35858 605 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 STAT5BP51692 787 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 EXOSC10Q01780 885 aaKnown RBP5.86□□□□□ -1.47
PRPF39-210ENST00000556718 SEC23AQ15436 765 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 HSP90AB2PQ58FF8 381 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 FIGNQ5HY92 759 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 ODR4Q5SWX8 454 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 TMEM200BQ69YZ2 307 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 BRAPQ7Z569 592 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 MRGPRGQ86SM5 289 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 RNF180Q86T96 592 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 DDX42Q86XP3 938 aaKnown RBP eCLIP5.86□□□□□ -1.47
PRPF39-210ENST00000556718 TMPRSS6Q8IU80 811 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 UBR7Q8N806 425 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 PCDH19Q8TAB3 1148 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 LEO1Q8WVC0 666 aaPredicted RBP5.86□□□□□ -1.47
PRPF39-210ENST00000556718 BTBD2Q9BX70 525 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 SLC52A2Q9HAB3 445 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 UCKL1Q9NWZ5 548 aa5.86□□□□□ -1.47
PRPF39-210ENST00000556718 REXO2Q9Y3B8 237 aaKnown RBP5.86□□□□□ -1.47
PRPF39-210ENST00000556718 A0A0G2JNJ9 132 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 WNT9AO14904 365 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 DNAJC8O75937 253 aaPredicted RBP5.85□□□□□ -1.47
PRPF39-210ENST00000556718 C6orf222P0C671 652 aaPredicted RBP5.85□□□□□ -1.47
PRPF39-210ENST00000556718 ECE1P42892 770 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 MTDHQ86UE4 582 aaKnown RBP5.85□□□□□ -1.47
PRPF39-210ENST00000556718 RTKN2Q8IZC4 609 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 GSTCDQ8NEC7 633 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 SHCBP1Q8NEM2 672 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 SLC7A14Q8TBB6 771 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 STAG1Q8WVM7 1258 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 JDP2Q8WYK2 163 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 CCDC136Q96JN2 1154 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 CRAMP1Q96RY5 1269 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 NELFAQ9H3P2 528 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 MSL2Q9HCI7 577 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 TRIM39Q9HCM9 518 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 AURKAIP1Q9NWT8 199 aaPredicted RBP5.85□□□□□ -1.47
PRPF39-210ENST00000556718 Q9UFV3 132 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 TCEAL9Q9UHQ7 104 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 G3BP2Q9UN86 482 aaKnown RBP5.85□□□□□ -1.47
PRPF39-210ENST00000556718 TNPO3Q9Y5L0 923 aaKnown RBP5.85□□□□□ -1.47
PRPF39-210ENST00000556718 TNFRSF18Q9Y5U5 241 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 PCSK5Q92824 1860 aa5.85□□□□□ -1.47
PRPF39-210ENST00000556718 ZNF561-AS1K7EIQ3 104 aa5.84□□□□□ -1.47
PRPF39-210ENST00000556718 SLC26A4O43511 780 aa5.84□□□□□ -1.47
PRPF39-210ENST00000556718 SRGAP2CP0DJJ0 459 aa5.84□□□□□ -1.47
PRPF39-210ENST00000556718 CDKN1CP49918 316 aaPredicted RBP5.84□□□□□ -1.47
PRPF39-210ENST00000556718 MEOX1P50221 254 aa5.84□□□□□ -1.47
PRPF39-210ENST00000556718 SLC25A3Q00325 362 aa5.84□□□□□ -1.47
PRPF39-210ENST00000556718 HHEXQ03014 270 aa5.84□□□□□ -1.47
PRPF39-210ENST00000556718 MOGSQ13724 837 aa5.84□□□□□ -1.47
PRPF39-210ENST00000556718 RRP1BQ14684 758 aaKnown RBP5.84□□□□□ -1.47
PRPF39-210ENST00000556718 ADGRE4PQ86SQ3 457 aa5.84□□□□□ -1.47
PRPF39-210ENST00000556718 FBXW5Q969U6 566 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms