RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SPPL3Q8TCT6 385 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 NEK9Q8TD19 979 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 NAP1L4Q99733 375 aaKnown RBP11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 C1QTNF1Q9BXJ1 281 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 GCOM2Q9BZD3 368 aaPredicted RBP11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 ADAMTS10Q9H324 1103 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 EPHX3Q9H6B9 360 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 TMEM161AQ9NX61 479 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 HOXA2O43364 376 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 CSDE1O75534 798 aaKnown RBP11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 GCFC2P16383 781 aaKnown RBP11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 DNAJB1P25685 340 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 KRT2P35908 639 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 NEK4P51957 841 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 TRIM29Q14134 588 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 PLA2G4FQ68DD2 849 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 NCAPH2Q6IBW4 605 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 RHPN2Q8IUC4 686 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 FAM178BQ8IXR5 827 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 GJD3Q8N144 294 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 FAM20AQ96MK3 541 aa11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 NIFKQ9BYG3 293 aaKnown RBP11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 ELAC1Q9H777 363 aaKnown RBP11.87□□□□□ -0.51
SPTLC2-205ENST00000556607 A0A087WZ62 844 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 EML1O00423 815 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 LINC01565O15544 149 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 FGF18O76093 207 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 CTDNEP1O95476 244 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 DARSP14868 501 aaKnown RBP11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 LAG3P18627 525 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 CA8P35219 290 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 IRS1P35568 1242 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 QARSP47897 775 aaKnown RBP11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 NRIP1P48552 1158 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 CDC42EP1Q00587 391 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 DRP2Q13474 957 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 DSC3Q14574 896 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 TARBP2Q15633 366 aaKnown RBP11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 ME3Q16798 604 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 PPP4R3AQ6IN85 833 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 ADGRD2Q7Z7M1 963 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 ECHDC2Q86YB7 292 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 LINC01465Q8N7H1 131 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 COLGALT1Q8NBJ5 622 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 CEP170P1Q96L14 293 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 NLRP4Q96MN2 994 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 MBOAT7Q96N66 472 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 JPH2Q9BR39 696 aaPredicted RBP11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 FDXACB1Q9BRP7 624 aaPredicted RBP11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 INO80BQ9C086 356 aaPredicted RBP11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 TMEM117Q9H0C3 514 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 TLR9Q9NR96 1032 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 BMP2KQ9NSY1 1161 aaPredicted RBP11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 DACT1Q9NYF0 836 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 SUCLA2Q9P2R7 463 aaPredicted RBP11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 HCSTQ9UBK5 93 aa11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 SPTBN5Q9NRC6 3674 aaKnown RBP11.86□□□□□ -0.51
SPTLC2-205ENST00000556607 LARGE1O95461 756 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 P4HBP07237 508 aaKnown RBP11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 SFPQP23246 707 aaKnown RBP eCLIP11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 POLGP54098 1239 aaPredicted RBP11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 FAM189BP81408 668 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 DLX2Q07687 328 aaPredicted RBP11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 NR5A1Q13285 461 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 PPP2R5CQ13362 524 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 CAMK1Q14012 370 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 LONRF3Q496Y0 759 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 TWF2Q6IBS0 349 aaKnown RBP11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 POTEDQ86YR6 584 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 SLFN12Q8IYM2 578 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 HELQQ8TDG4 1101 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 SLC7A3Q8WY07 619 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 CASD1Q96PB1 797 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 CWH43Q9H720 699 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 TLE6Q9H808 572 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 CD320Q9NPF0 282 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 CYP26B1Q9NR63 512 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 RAPGEFL1Q9UHV5 662 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 PUF60Q9UHX1 559 aaKnown RBP11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 CD207Q9UJ71 328 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 PIN4Q9Y237 131 aaKnown RBP11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 PCDHGC5Q9Y5F6 944 aa11.85□□□□□ -0.51
SPTLC2-205ENST00000556607 FAM86C2PA6NEL3 165 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 PER2O15055 1255 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 TBX3O15119 743 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 MBTPS2O43462 519 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 MAFO75444 373 aaPredicted RBP11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 ATP2B1P20020 1258 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 LTBRP36941 435 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 PBX3P40426 434 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 NPEPPSP55786 919 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 CYP4A11Q02928 519 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 KRT17Q04695 432 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms