RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 EXOC8Q8IYI6 725 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 KIAA0319LQ8IZA0 1049 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 DAW1Q8N136 415 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 RETREG2Q8NC44 543 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 MCPH1Q8NEM0 835 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 DHX38Q92620 1227 aaKnown RBP19.32■□□□□ 0.68
TUBB3-211ENST00000556536 DDX12PQ92771 950 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 LRCH3Q96II8 777 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 JPH2Q9BR39 696 aaPredicted RBP19.32■□□□□ 0.68
TUBB3-211ENST00000556536 REEP2Q9BRK0 252 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 BLZF1Q9H2G9 400 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 KCND2Q9NZV8 630 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 NOD1Q9Y239 953 aa19.32■□□□□ 0.68
TUBB3-211ENST00000556536 RSPH10B2B2RC85 870 aa19.31■□□□□ 0.68
TUBB3-211ENST00000556536 KRT18P05783 430 aaKnown RBP19.31■□□□□ 0.68
TUBB3-211ENST00000556536 RSPH10BP0C881 870 aa19.31■□□□□ 0.68
TUBB3-211ENST00000556536 MDM2Q00987 491 aaPredicted RBP19.31■□□□□ 0.68
TUBB3-211ENST00000556536 PTK7Q13308 1070 aa19.31■□□□□ 0.68
TUBB3-211ENST00000556536 DNAJB3Q8WWF6 145 aa19.31■□□□□ 0.68
TUBB3-211ENST00000556536 DNAJC19Q96DA6 116 aa19.31■□□□□ 0.68
TUBB3-211ENST00000556536 C7orf25Q9BPX7 421 aa19.31■□□□□ 0.68
TUBB3-211ENST00000556536 TRIM9Q9C026 710 aa19.31■□□□□ 0.68
TUBB3-211ENST00000556536 POLR3FQ9H1D9 316 aaPredicted RBP19.31■□□□□ 0.68
TUBB3-211ENST00000556536 SUCLA2Q9P2R7 463 aaPredicted RBP19.31■□□□□ 0.68
TUBB3-211ENST00000556536 MYH9P35579 1960 aaKnown RBP19.31■□□□□ 0.68
TUBB3-211ENST00000556536 MROH7Q68CQ1 1323 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 SFI1A8K8P3 1242 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 MBD3O95983 291 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 ARL2P36404 184 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 AMPD3Q01432 767 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 FAAP100Q0VG06 881 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 TRIM71Q2Q1W2 868 aaKnown RBP19.3■□□□□ 0.68
TUBB3-211ENST00000556536 IER5Q5VY09 327 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 TAF2Q6P1X5 1199 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 ASAP3Q8TDY4 903 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 PRPF31Q8WWY3 499 aaKnown RBP19.3■□□□□ 0.68
TUBB3-211ENST00000556536 TOX2Q96NM4 488 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 LRRC27Q9C0I9 530 aa19.3■□□□□ 0.68
TUBB3-211ENST00000556536 DCDC2CA8MYV0 355 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 RBAK-RBAKDNI3L0D1 243 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 TLR3O15455 904 aaKnown RBP19.29■□□□□ 0.68
TUBB3-211ENST00000556536 GTPBP6O43824 516 aaPredicted RBP19.29■□□□□ 0.68
TUBB3-211ENST00000556536 GAS2O43903 313 aaKnown RBP19.29■□□□□ 0.68
TUBB3-211ENST00000556536 VTNP04004 478 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 TMOD1P28289 359 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 DNM2P50570 870 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 TMEM62Q0P6H9 643 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 POSTNQ15063 836 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 GPR153Q6NV75 609 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 KANK3Q6NY19 840 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 CNNM4Q6P4Q7 775 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 KSR1Q8IVT5 923 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 TCP11Q8WWU5 503 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 BSNDQ8WZ55 320 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 ERCC4Q92889 916 aaPredicted RBP19.29■□□□□ 0.68
TUBB3-211ENST00000556536 TIPINQ9BVW5 301 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 AKT3Q9Y243 479 aa19.29■□□□□ 0.68
TUBB3-211ENST00000556536 GLRA2P23416 452 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 BMP8BP34820 402 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 ASIC1P78348 528 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 DPYDQ12882 1025 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 PNOCQ13519 176 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 CAMK4Q16566 473 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 PSPC1Q8WXF1 523 aaKnown RBP19.28■□□□□ 0.68
TUBB3-211ENST00000556536 KIFAP3Q92845 792 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 ZNF668Q96K58 619 aaPredicted RBP19.28■□□□□ 0.68
TUBB3-211ENST00000556536 MAP7D2Q96T17 732 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 PPP1R16BQ96T49 567 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 CLSTN2Q9H4D0 955 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 ODF2LQ9ULJ1 636 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 ARID2Q68CP9 1835 aa19.28■□□□□ 0.68
TUBB3-211ENST00000556536 TBCAO75347 108 aaKnown RBP19.27■□□□□ 0.68
TUBB3-211ENST00000556536 IDEP14735 1019 aa19.27■□□□□ 0.68
TUBB3-211ENST00000556536 PTMSP20962 102 aa19.27■□□□□ 0.68
TUBB3-211ENST00000556536 THPOP40225 353 aa19.27■□□□□ 0.68
TUBB3-211ENST00000556536 ZNF131P52739 623 aa19.27■□□□□ 0.68
TUBB3-211ENST00000556536 LAMTOR4Q0VGL1 99 aa19.27■□□□□ 0.68
TUBB3-211ENST00000556536 RPAINQ86UA6 219 aa19.27■□□□□ 0.68
TUBB3-211ENST00000556536 RHPN2Q8IUC4 686 aa19.27■□□□□ 0.68
TUBB3-211ENST00000556536 ELOA2Q8IYF1 753 aaPredicted RBP19.27■□□□□ 0.68
TUBB3-211ENST00000556536 DRC1Q96MC2 740 aa19.27■□□□□ 0.68
TUBB3-211ENST00000556536 ZHX3Q9H4I2 956 aa19.27■□□□□ 0.68
TUBB3-211ENST00000556536 COL4A3BPQ9Y5P4 624 aa19.27■□□□□ 0.68
TUBB3-211ENST00000556536 FRMD3A2A2Y4 597 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 KLRC4O43908 158 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 FAM13AO94988 1023 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 CLTBP09497 229 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 CTSHP09668 335 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 CAPSQ13938 189 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 NME8Q8N427 588 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 CCDC34Q96HJ3 373 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 GDF15Q99988 308 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 ADAMTS10Q9H324 1103 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 CDHR5Q9HBB8 845 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 PANK4Q9NVE7 773 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 TBX21Q9UL17 535 aa19.26■□□□□ 0.67
TUBB3-211ENST00000556536 GPR32O75388 356 aa19.25■□□□□ 0.67
TUBB3-211ENST00000556536 MYL1P05976 194 aa19.25■□□□□ 0.67
TUBB3-211ENST00000556536 SRGAP2CP0DJJ0 459 aa19.25■□□□□ 0.67
TUBB3-211ENST00000556536 CKBP12277 381 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms