RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZNF16P17020 682 aaPredicted RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 TUFMP49411 452 aaKnown RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 SPDYE2Q495Y8 402 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 Q4G0T1 1027 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 PACS1Q6VY07 963 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 UNC13DQ70J99 1090 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 DYMQ7RTS9 669 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 MB21D1Q8N884 522 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 SUPT20HQ8NEM7 779 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 ACER1Q8TDN7 264 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 TRIM47Q96LD4 638 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 DNAI1Q9UI46 699 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 HERC5Q9UII4 1024 aaKnown RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 COL4A3BPQ9Y5P4 624 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 TTC26A0AVF1 554 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 MAGEA10P43363 369 aaPredicted RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 USP11P51784 963 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 ARHGAP4P98171 946 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 ITIH3Q06033 890 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 BNIP1Q12981 228 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 CRYMQ14894 314 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 TMEM266Q2M3C6 531 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 USH1GQ495M9 461 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 KAZNQ674X7 775 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 WDR59Q6PJI9 974 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 SV2BQ7L1I2 683 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 CNGA4Q8IV77 575 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 CSGALNACT2Q8N6G5 542 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 MGARPQ8TDB4 240 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 ZBED3Q96IU2 234 aaPredicted RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 JPH2Q9BR39 696 aaPredicted RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 AMNQ9BXJ7 453 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 NAA15Q9BXJ9 866 aaKnown RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 RNF39Q9H2S5 420 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 ZSWIM4Q9H7M6 989 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 ZNF70Q9UC06 446 aaPredicted RBP5.54□□□□□ -1.52
TMEM260-210ENST00000556422 PCDHA12Q9UN75 941 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 LZTS1Q9Y250 596 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 MYH10P35580 1976 aa5.54□□□□□ -1.52
TMEM260-210ENST00000556422 PVALEFA0A1B0GWK0 134 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 A0A1W2PQC6 194 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 ENO4A6NNW6 628 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 ZSCAN12O43309 604 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 BMP3P12645 472 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 ENPP1P22413 925 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 SREBF1P36956 1147 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 KLK7P49862 253 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 UBXN1Q04323 297 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 AP3B2Q13367 1082 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 C10orf76Q5T2E6 689 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 SYDE2Q5VT97 1194 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 KRT79Q5XKE5 535 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 MOXD1Q6UVY6 613 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 LRRC55Q6ZSA7 311 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 IPCEF1Q8WWN9 437 aaPredicted RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 GOLGA1Q92805 767 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 CNOT6LQ96LI5 555 aaKnown RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 NAP1L3Q99457 506 aaPredicted RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 TUBGCP2Q9BSJ2 902 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 TMEM39BQ9GZU3 492 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 DCAF16Q9NXF7 216 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 KCTD5Q9NXV2 234 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 PCDHA2Q9Y5H9 948 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 RLFQ13129 1914 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 LOXHD1Q8IVV2 1947 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 POTEB3A0JP26 581 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 GRXCR2A6NFK2 248 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 A6NJR5 290 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 PRSS47A8MTI9 375 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 POTECB2RU33 542 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 B4DLN1 442 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 E9PMD0 336 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 KDM1AO60341 852 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 MED24O75448 989 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 TUBB4AP04350 444 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 IVLP07476 585 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 STAT3P40763 770 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 ARPC4P59998 168 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 MUM1Q2TAK8 710 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 ZCWPW2Q504Y3 356 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 SDE2Q6IQ49 451 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 POTEBQ6S5H4 581 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 PPFIBP1Q86W92 1011 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 PLPP6Q8IY26 295 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 RTKN2Q8IZC4 609 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 CYP2W1Q8TAV3 490 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 FAM151AQ8WW52 585 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 RNF25Q96BH1 459 aaPredicted RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 CCDC51Q96ER9 411 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 ERO1AQ96HE7 468 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 DNAJC7Q99615 494 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 CHP1Q99653 195 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 GLIS2Q9BZE0 524 aaPredicted RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 RAB34Q9BZG1 259 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 VCX3BQ9H321 246 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 ZBTB21Q9ULJ3 1066 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms