RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 ANXA1P04083 346 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 C8BP07358 591 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 HSPA1AP0DMV8 641 aaKnown RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 HSPA1BP0DMV9 641 aaKnown RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 ZNF16P17020 682 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 EPHX2P34913 555 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 TMPOP42166 694 aaKnown RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 GRM1Q13255 1194 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 DEFB115Q30KQ5 88 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 PARP10Q53GL7 1025 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 HSP90AB3PQ58FF7 597 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 CPZQ66K79 652 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 GLB1LQ6UWU2 654 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 DDX46Q7L014 1031 aaKnown RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 COPS6Q7L5N1 327 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 PNMA8AQ86V59 439 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 NIM1KQ8IY84 436 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 CNTROBQ8N137 903 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 CRACR2BQ8N4Y2 399 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 JMYQ8N9B5 988 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 SUPT20HQ8NEM7 779 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 ZNF428Q96B54 188 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 SPATA32Q96LK8 384 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 GORASP1Q9BQQ3 440 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 MTA3Q9BTC8 594 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 C11orf84Q9BUA3 381 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 GINM1Q9NU53 330 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 TRMT112Q9UI30 125 aaKnown RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 ABT1Q9ULW3 272 aaKnown RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 AKT3Q9Y243 479 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 EFR3BQ9Y2G0 817 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 COL3A1P02461 1466 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-240ENST00000556339 RNF123Q5XPI4 1314 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 NUP98P52948 1817 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 KLRG2A4D1S0 409 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-240ENST00000556339 PPP1R11O60927 126 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-240ENST00000556339 BBOX1O75936 387 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 PLATP00750 562 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 RPL13P26373 211 aaKnown RBP4.98□□□□□ -1.61
ATXN3-240ENST00000556339 THBS2P35442 1172 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 PAK2Q13177 524 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 MCTP2Q6DN12 878 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 POMZP3Q6PJE2 187 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 DPP8Q6V1X1 898 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-240ENST00000556339 STK32CQ86UX6 486 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 ZNF34Q8IZ26 560 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 ZNF654Q8IZM8 581 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 GPC2Q8N158 579 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 ARHGEF39Q8N4T4 335 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 OR6P1Q8NGX9 317 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 CPLX3Q8WVH0 158 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 RUNDC1Q96C34 613 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 RCC1LQ96I51 464 aaKnown RBP4.98□□□□□ -1.61
ATXN3-240ENST00000556339 SAMD11Q96NU1 681 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 CRAMP1Q96RY5 1269 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 PLEKHF1Q96S99 279 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 BABAM1Q9NWV8 329 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 INVSQ9Y283 1065 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 TNRC6CQ9HCJ0 1690 aaKnown RBP4.98□□□□□ -1.61
ATXN3-240ENST00000556339 ADAMTS7Q9UKP4 1686 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 UBR2Q8IWV8 1755 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 FER1L6Q2WGJ9 1857 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 ANKRD31Q8N7Z5 1873 aa4.98□□□□□ -1.61
ATXN3-240ENST00000556339 ZNF541Q9H0D2 1346 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 WDR90Q96KV7 1748 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 NRXN2Q9P2S2 1712 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 DLG5Q8TDM6 1919 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 SIPA1L3O60292 1781 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-240ENST00000556339 A0A1W2PQH9 124 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 MROH6A6NGR9 719 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 FZD9O00144 591 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 NOP56O00567 594 aaKnown RBP4.97□□□□□ -1.61
ATXN3-240ENST00000556339 FSHBP01225 129 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 NAT2P11245 290 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 PLS3P13797 630 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 TNFRSF1AP19438 455 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 EPS15P42566 896 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 SCRN1Q12765 414 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 TCIRG1Q13488 830 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 TNIP1Q15025 636 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 TBC1D10BQ4KMP7 808 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-240ENST00000556339 LDLRAD1Q5T700 205 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 PRAMEF18Q5VWM3 479 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 KIAA1211LQ6NV74 962 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 VHLLQ6RSH7 139 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 TEX2Q8IWB9 1127 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 LINC00482Q8N8I6 264 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 C19orf47Q8N9M1 422 aaKnown RBP4.97□□□□□ -1.61
ATXN3-240ENST00000556339 KYQ8NBH2 561 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 KISS1RQ969F8 398 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-240ENST00000556339 PSMD1Q99460 953 aa4.97□□□□□ -1.61
ATXN3-240ENST00000556339 DDX21Q9NR30 783 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATXN3-240ENST00000556339 ANKRD34BA5PLL1 514 aa4.96□□□□□ -1.62
ATXN3-240ENST00000556339 C22orf46C9J442 243 aa4.96□□□□□ -1.62
ATXN3-240ENST00000556339 H7C1D1 291 aa4.96□□□□□ -1.62
ATXN3-240ENST00000556339 ELL2O00472 640 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-240ENST00000556339 MATN3O15232 486 aa4.96□□□□□ -1.62
ATXN3-240ENST00000556339 AKAP8O43823 692 aaKnown RBP4.96□□□□□ -1.62
ATXN3-240ENST00000556339 RAD17O75943 681 aa4.96□□□□□ -1.62
ATXN3-240ENST00000556339 NTSR2O95665 410 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms