RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 NME2P22392 152 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 CYP7A1P22680 504 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 GUCY1A2P33402 732 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 SHMT1P34896 483 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 KCNQ1P51787 676 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 TFF2Q03403 129 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 MTX1Q13505 466 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 PWP1Q13610 501 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 SEPT2Q15019 361 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 TTC39AQ5SRH9 613 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 CCSAPQ6IQ19 270 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-239ENST00000556315 RIOX2Q8IUF8 465 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 RPUSD2Q8IZ73 545 aaKnown RBP5.84□□□□□ -1.47
ATXN3-239ENST00000556315 MSL3Q8N5Y2 521 aaKnown RBP5.84□□□□□ -1.47
ATXN3-239ENST00000556315 RNF34Q969K3 372 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 ZNF512BQ96KM6 892 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-239ENST00000556315 API5Q9BZZ5 524 aaKnown RBP5.84□□□□□ -1.47
ATXN3-239ENST00000556315 TANGO6Q9C0B7 1094 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 SPC25Q9HBM1 224 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 KRT82Q9NSB4 513 aa5.84□□□□□ -1.47
ATXN3-239ENST00000556315 YBX2Q9Y2T7 364 aaKnown RBP5.84□□□□□ -1.47
ATXN3-239ENST00000556315 MUC3AQ02505 3323 aa5.84□□□□□ -1.48
ATXN3-239ENST00000556315 DOCK1Q14185 1865 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 PLXNB2O15031 1838 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 PHIPQ8WWQ0 1821 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 A0A0U1RQG5 324 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-239ENST00000556315 PI4K2BG5E9Z4 385 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 MPHOSPH10O00566 681 aaKnown RBP5.83□□□□□ -1.48
ATXN3-239ENST00000556315 PGK2P07205 417 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 ASGR1P07306 291 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 CELA3AP09093 270 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 TCF3P15923 654 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 CST5P28325 142 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-239ENST00000556315 COPB2P35606 906 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 STAT3P40763 770 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 PLCD1P51178 756 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 FANCCQ00597 558 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 ID3Q02535 119 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 TMEM132BQ14DG7 1078 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 LRRC14Q15048 493 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 TMED8Q6PL24 325 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-239ENST00000556315 SULF2Q8IWU5 870 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 MIGA1Q8NAN2 632 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 ATG4CQ96DT6 458 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 MEIS3Q99687 375 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 SEZ6LQ9BYH1 1024 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 ATXN3LQ9H3M9 355 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 SH2D4AQ9H788 454 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 GPR108Q9NPR9 543 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 PIH1D3Q9NQM4 214 aaKnown RBP5.83□□□□□ -1.48
ATXN3-239ENST00000556315 DISC1Q9NRI5 854 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 SMC4Q9NTJ3 1288 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 NOB1Q9ULX3 412 aaKnown RBP5.83□□□□□ -1.48
ATXN3-239ENST00000556315 ADAMTS5Q9UNA0 930 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 PCDHA11Q9Y5I1 949 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 SLC4A7Q9Y6M7 1214 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 PRUNE2Q8WUY3 3088 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 LOC285556D6RIA3 1793 aa5.83□□□□□ -1.48
ATXN3-239ENST00000556315 ROBO3Q96MS0 1386 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 SYNRGQ9UMZ2 1314 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 SMIM22K7EJ46 135 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 CABYRO75952 493 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 SNAI1O95863 264 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-239ENST00000556315 CD4P01730 458 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 C6orf222P0C671 652 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-239ENST00000556315 SLFN14P0C7P3 912 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 FAM87AP0C7U9 286 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 FUT4P22083 530 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 CYP2C18P33260 490 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 RABGGTBP53611 331 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 GJA9P57773 515 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 RPS26P62854 115 aaKnown RBP5.82□□□□□ -1.48
ATXN3-239ENST00000556315 GABPAQ06546 454 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 BNIP3Q12983 259 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 PLCL1Q15111 1095 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 TMEM67Q5HYA8 995 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 KIAA1755Q5JYT7 1200 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 PCNX4Q63HM2 1172 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 TTBK2Q6IQ55 1244 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 MAMDC4Q6UXC1 1216 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 TMEM179Q6ZVK1 233 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 OTOP2Q7RTS6 562 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 SIAH1Q8IUQ4 282 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 RELL1Q8IUW5 271 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 FAM126BQ8IXS8 530 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 SMYD4Q8IYR2 804 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-239ENST00000556315 PLD6Q8N2A8 252 aaKnown RBP5.82□□□□□ -1.48
ATXN3-239ENST00000556315 NETO1Q8TDF5 533 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 RSRP1Q9BUV0 290 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 MKNK2Q9HBH9 465 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 GGT7Q9UJ14 662 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 CYP8B1Q9UNU6 501 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 TMX2Q9Y320 296 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 MTCH2Q9Y6C9 303 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-239ENST00000556315 EYSQ5T1H1 3165 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 PTPRFP10586 1907 aa5.82□□□□□ -1.48
ATXN3-239ENST00000556315 DOCK2Q92608 1830 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 CDH23Q9H251 3354 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms