RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 C4orf19Q8IY42 314 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 LRRC71Q8N4P6 559 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 NECAB1Q8N987 351 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 OXER1Q8TDS5 423 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 HAS1Q92839 578 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 LLPHQ9BRT6 129 aaKnown RBP14.15□□□□□ -0.14
SNX6-207ENST00000556303 UBE2ZQ9H832 354 aaPredicted RBP14.15□□□□□ -0.14
SNX6-207ENST00000556303 CHST12Q9NRB3 414 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 AAASQ9NRG9 546 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 SEPT9Q9UHD8 586 aaPredicted RBP14.15□□□□□ -0.14
SNX6-207ENST00000556303 DDX11L8A8MPP1 907 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 EML1O00423 815 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 GAS2O43903 313 aaKnown RBP14.14□□□□□ -0.15
SNX6-207ENST00000556303 LARGE1O95461 756 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 SEC24BO95487 1268 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 MTERF2Q49AM1 385 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 OTUD6AQ7L8S5 288 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 ZNF410Q86VK4 478 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 PPP2R3CQ969Q6 453 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 PABPC5Q96DU9 382 aaKnown RBP14.14□□□□□ -0.15
SNX6-207ENST00000556303 ZSCAN31Q96LW9 406 aaPredicted RBP14.14□□□□□ -0.15
SNX6-207ENST00000556303 TRAIPQ9BWF2 469 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 GCOM2Q9BZD3 368 aaPredicted RBP14.14□□□□□ -0.15
SNX6-207ENST00000556303 ATP6V0A4Q9HBG4 840 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 DACT1Q9NYF0 836 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 PLAGL2Q9UPG8 496 aa14.14□□□□□ -0.15
SNX6-207ENST00000556303 MRPL42Q9Y6G3 142 aaKnown RBP14.14□□□□□ -0.15
SNX6-207ENST00000556303 RBAK-RBAKDNI3L0D1 243 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 EOMESO95936 686 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 KCNQ1P51787 676 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 UBE3AQ05086 875 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 NR5A1Q13285 461 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 SAFBQ15424 915 aaKnown RBP eCLIP14.13□□□□□ -0.15
SNX6-207ENST00000556303 ANO5Q75V66 913 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 NEK9Q8TD19 979 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 NLRP7Q8WX94 980 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 SLC7A3Q8WY07 619 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 ZSWIM4Q9H7M6 989 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 CYP26B1Q9NR63 512 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 SH2B1Q9NRF2 756 aaPredicted RBP14.13□□□□□ -0.15
SNX6-207ENST00000556303 GJB4Q9NTQ9 266 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 PCDHB12Q9Y5F1 795 aa14.13□□□□□ -0.15
SNX6-207ENST00000556303 A0A0U1RQF3 1178 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 CARNS1A5YM72 827 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 GRM6O15303 877 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 ASAP2O43150 1006 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 SKIP12755 728 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 SFPQP23246 707 aaKnown RBP eCLIP14.12□□□□□ -0.15
SNX6-207ENST00000556303 RFC5P40937 340 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 HMGN5P82970 282 aaKnown RBP14.12□□□□□ -0.15
SNX6-207ENST00000556303 SPIRE1Q08AE8 756 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 TCEAL5Q5H9L2 206 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 EARS2Q5JPH6 523 aaKnown RBP14.12□□□□□ -0.15
SNX6-207ENST00000556303 DIS3L2Q8IYB7 885 aaKnown RBP14.12□□□□□ -0.15
SNX6-207ENST00000556303 SPPL3Q8TCT6 385 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 SCLT1Q96NL6 688 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 PPP1R16BQ96T49 567 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 TMEM117Q9H0C3 514 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 DHX33Q9H6R0 707 aaKnown RBP14.12□□□□□ -0.15
SNX6-207ENST00000556303 SUCLA2Q9P2R7 463 aaPredicted RBP14.12□□□□□ -0.15
SNX6-207ENST00000556303 PCDHA12Q9UN75 941 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 FAM50BQ9Y247 325 aa14.12□□□□□ -0.15
SNX6-207ENST00000556303 TCF20Q9UGU0 1960 aaKnown RBP14.12□□□□□ -0.15
SNX6-207ENST00000556303 FSD2A1L4K1 749 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 TBKBP1A7MCY6 615 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 BTBD18B2RXH4 712 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 JAK2O60674 1132 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 LYPLA2O95372 231 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 ORC2Q13416 577 aaPredicted RBP14.11□□□□□ -0.15
SNX6-207ENST00000556303 PCBP1Q15365 356 aaKnown RBP eCLIP14.11□□□□□ -0.152e-8■■■■■ 73.5
SNX6-207ENST00000556303 CTC1Q2NKJ3 1217 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 PAN2Q504Q3 1202 aaKnown RBP14.11□□□□□ -0.15
SNX6-207ENST00000556303 FAM102BQ5T8I3 360 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 PDE12Q6L8Q7 609 aaKnown RBP14.11□□□□□ -0.15
SNX6-207ENST00000556303 ECHDC2Q86YB7 292 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 KLHL23Q8NBE8 558 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 TCP11Q8WWU5 503 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 CEP170P1Q96L14 293 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 LXNQ9BS40 222 aa14.11□□□□□ -0.15
SNX6-207ENST00000556303 FNDC1Q4ZHG4 1894 aaPredicted RBP14.1□□□□□ -0.15
SNX6-207ENST00000556303 NEMFO60524 1076 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 ITGB1P05556 798 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 XRCC6P12956 609 aaKnown RBP eCLIP14.1□□□□□ -0.15
SNX6-207ENST00000556303 LAG3P18627 525 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 KCNA5P22460 613 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 YWHABP31946 246 aaKnown RBP14.1□□□□□ -0.15
SNX6-207ENST00000556303 RBM25P49756 843 aaKnown RBP14.1□□□□□ -0.15
SNX6-207ENST00000556303 DRP2Q13474 957 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 CALCRLQ16602 461 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 C8orf34Q49A92 452 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 SPOUT1Q5T280 376 aaKnown RBP14.1□□□□□ -0.15
SNX6-207ENST00000556303 NCAPH2Q6IBW4 605 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 SRGAP1Q7Z6B7 1085 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 RHPN2Q8IUC4 686 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 MTMR9Q96QG7 549 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 HSD17B14Q9BPX1 270 aa14.1□□□□□ -0.15
SNX6-207ENST00000556303 FOXP1Q9H334 677 aaPredicted RBP14.1□□□□□ -0.15
SNX6-207ENST00000556303 ALG13Q9NP73 1137 aaKnown RBP14.1□□□□□ -0.15
SNX6-207ENST00000556303 TYW1Q9NV66 732 aaKnown RBP14.1□□□□□ -0.15
SNX6-207ENST00000556303 LZTS1Q9Y250 596 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms