RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 PTPN11Q06124 597 aaPredicted RBP11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 TBC1D8BQ0IIM8 1120 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 PPFIA1Q13136 1202 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 NBPF20Q3BBV1 942 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 MTERF2Q49AM1 385 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 ARSHQ5FYA8 562 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 CCDC183Q5T5S1 534 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 NFRKBQ6P4R8 1299 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 C1orf186Q6ZWK4 172 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 SESTD1Q86VW0 696 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 GPBP1Q86WP2 473 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 SLC7A3Q8WY07 619 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 VTI1AQ96AJ9 217 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 ZBED2Q9BTP6 218 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 TRIM9Q9C026 710 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 NUP62CLQ9H1M0 184 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 DHX33Q9H6R0 707 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 PDLIM7Q9NR12 457 aa11.16□□□□□ -0.62
MTHFD1-213ENST00000556284 HTTP42858 3142 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 IGKV6-21A0A0C4DH24 114 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 PVALEFA0A1B0GWK0 134 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 A0A1W2PQ45 241 aaPredicted RBP11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 A0A1W2PQY0 241 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 GAS2O43903 313 aaKnown RBP11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 MAFO75444 373 aaPredicted RBP11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 SMC2O95347 1197 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 KRT18P05783 430 aaKnown RBP11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 HOXC8P31273 242 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 POLGP54098 1239 aaPredicted RBP11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 CHMP4BP1P59074 171 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 POSTNQ15063 836 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 GRIK4Q16099 956 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 C7orf31Q8N865 590 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 RETREG2Q8NC44 543 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 MCPH1Q8NEM0 835 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 STAMQ92783 540 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 SH2D3AQ9BRG2 576 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 RUSC1Q9BVN2 902 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 ATP6V0A4Q9HBG4 840 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 SETD4Q9NVD3 440 aa11.15□□□□□ -0.62
MTHFD1-213ENST00000556284 A0A0U1RQG5 324 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 C17orf102A2RUQ5 167 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 MBLAC1A4D2B0 266 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 TRIM66O15016 1216 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 USO1O60763 962 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 LETM1O95202 739 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 C22orf31O95567 290 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 KLRC1P26715 233 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 RTP1P59025 263 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 ADAM17P78536 824 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 DPYDQ12882 1025 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 CUL4BQ13620 913 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 ITGA7Q13683 1181 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 GIT2Q14161 759 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 CAMK4Q16566 473 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 DMRTA1Q5VZB9 504 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 CAVIN1Q6NZI2 390 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 MTHFD1LQ6UB35 978 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 PACS2Q86VP3 889 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 GRAMD1CQ8IYS0 662 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 SLC43A3Q8NBI5 491 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 TCP11Q8WWU5 503 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 DNAJC19Q96DA6 116 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 DRC1Q96MC2 740 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 SLC4A5Q9BY07 1137 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 STARD7Q9NQZ5 370 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 HDAC6Q9UBN7 1215 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 GTF2IRD1Q9UHL9 959 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 KCNG1Q9UIX4 513 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 ODF2LQ9ULJ1 636 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 COL4A3BPQ9Y5P4 624 aa11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 MYH9P35579 1960 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-213ENST00000556284 GRIN2DO15399 1336 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 FRMD3A2A2Y4 597 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 HIP1RO75146 1068 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 RPN1P04843 607 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 RPLP2P05387 115 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 TMOD1P28289 359 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 DNM2P50570 870 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 IGBP1P78318 339 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 ASIC1P78348 528 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 PNOCQ13519 176 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 EMC2Q15006 297 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 MARCH8Q5T0T0 291 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 NT5DC1Q5TFE4 455 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 IER5Q5VY09 327 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 RBM43Q6ZSC3 357 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 UNC13DQ70J99 1090 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 DYMQ7RTS9 669 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 CCDC65Q8IXS2 484 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 SPATA20Q8TB22 786 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 LMBR1Q8WVP7 490 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 TRAPPC12Q8WVT3 735 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 KIFAP3Q92845 792 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 SMARCE1Q969G3 411 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 CCDC47Q96A33 483 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 GSDMAQ96QA5 445 aa11.13□□□□□ -0.63
MTHFD1-213ENST00000556284 REEP2Q9BRK0 252 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms