RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 CA8P35219 290 aa18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 CES5AQ6NT32 575 aa18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 KCNT2Q6UVM3 1135 aa18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 KIAA0319LQ8IZA0 1049 aa18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 INTS4Q96HW7 963 aaKnown RBP18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 ADAM7Q9H2U9 754 aa18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 NGRNQ9NPE2 291 aaKnown RBP18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 KCNH7Q9NS40 1196 aa18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 SEC63Q9UGP8 760 aaKnown RBP18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 PCDHA6Q9UN73 950 aa18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 LZTS1Q9Y250 596 aa18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 PCDHA8Q9Y5H6 950 aa18.01■□□□□ 0.47
SDR39U1-217ENST00000556249 PI15O43692 258 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 KIF5BP33176 963 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 CCT2P78371 535 aaKnown RBP18■□□□□ 0.47
SDR39U1-217ENST00000556249 SCRN1Q12765 414 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 RTN1Q16799 776 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 KIZQ2M2Z5 673 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 RARS2Q5T160 578 aaKnown RBP18■□□□□ 0.47
SDR39U1-217ENST00000556249 CPLX2Q6PUV4 134 aaKnown RBP18■□□□□ 0.47
SDR39U1-217ENST00000556249 PLPPR4Q7Z2D5 763 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 FAM228AQ86W67 206 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 CCDC83Q8IWF9 413 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 SRBD1Q8N5C6 995 aaKnown RBP18■□□□□ 0.47
SDR39U1-217ENST00000556249 NECAB1Q8N987 351 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 FANCBQ8NB91 859 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 CTCFLQ8NI51 663 aaPredicted RBP18■□□□□ 0.47
SDR39U1-217ENST00000556249 CASP10Q92851 521 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 CASD1Q96PB1 797 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 OSMRQ99650 979 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 SPZ1Q9BXG8 430 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 RBM28Q9NW13 759 aaKnown RBP18■□□□□ 0.47
SDR39U1-217ENST00000556249 TMEM161AQ9NX61 479 aa18■□□□□ 0.47
SDR39U1-217ENST00000556249 SPDYE3A6NKU9 549 aa17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 DDX39AO00148 427 aaKnown RBP17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 GPR182O15218 404 aa17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 RXRAP19793 462 aa17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 TPRNQ4KMQ1 711 aa17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 CWF19L1Q69YN2 538 aaKnown RBP17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 TRMT1LQ7Z2T5 733 aaKnown RBP17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 RAB11FIP4Q86YS3 637 aa17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 TNPO1Q92973 898 aaKnown RBP17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 PGBD1Q96JS3 809 aa17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 LLPHQ9BRT6 129 aaKnown RBP17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 RNF19AQ9NV58 838 aa17.99■□□□□ 0.47
SDR39U1-217ENST00000556249 CPLX1O14810 134 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 MAFGO15525 162 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 CLASP2O75122 1294 aaKnown RBP17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 GNAQP50148 359 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 FAM189BP81408 668 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 KRT17Q04695 432 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 ST3GAL1Q11201 340 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 ITGB3BPQ13352 177 aaPredicted RBP17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 MCTP2Q6DN12 878 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 CCDC82Q8N4S0 544 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 MRPL43Q8N983 215 aaKnown RBP17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 ZNF558Q96NG5 402 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 NECTIN4Q96NY8 510 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 MXRA8Q9BRK3 442 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 SDF4Q9BRK5 362 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 TMEM117Q9H0C3 514 aa17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 NCOA5Q9HCD5 579 aaKnown RBP17.98■□□□□ 0.47
SDR39U1-217ENST00000556249 C2orf71A6NGG8 1288 aa17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 NT5C1B-RDH14C9J2C7 533 aa17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 CDKL5O76039 1030 aa17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 VTNP04004 478 aa17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 CLCN5P51795 746 aa17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 ITIH3Q06033 890 aa17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 DSC3Q14574 896 aa17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 SMC1AQ14683 1233 aaKnown RBP17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 TDRD5Q8NAT2 981 aaKnown RBP17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 RNF169Q8NCN4 708 aa17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 AUTS2Q8WXX7 1259 aa17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 SPG21Q9NZD8 308 aa17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 DBR1Q9UK59 544 aaKnown RBP17.97■□□□□ 0.47
SDR39U1-217ENST00000556249 MED19A0JLT2 244 aaPredicted RBP17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 BACH1O14867 736 aa17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 CCNE2O96020 404 aa17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 NPR3P17342 541 aa17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 CDC27P30260 824 aa17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 ADD1P35611 737 aaKnown RBP17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 MTHFRP42898 656 aa17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 ELAC1Q9H777 363 aaKnown RBP17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 AGO4Q9HCK5 861 aaKnown RBP17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 FAM217BQ9NTX9 383 aaPredicted RBP17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 EVPLQ92817 2033 aa17.96■□□□□ 0.47
SDR39U1-217ENST00000556249 NFASCO94856 1347 aa17.96■□□□□ 0.46
SDR39U1-217ENST00000556249 ZBTB42B2RXF5 422 aa17.95■□□□□ 0.46
SDR39U1-217ENST00000556249 HBP1O60381 514 aa17.95■□□□□ 0.46
SDR39U1-217ENST00000556249 ATG7O95352 703 aa17.95■□□□□ 0.46
SDR39U1-217ENST00000556249 CXCL14O95715 111 aa17.95■□□□□ 0.46
SDR39U1-217ENST00000556249 EPCAMP16422 314 aa17.95■□□□□ 0.46
SDR39U1-217ENST00000556249 CRYBB1P53674 252 aaPredicted RBP17.95■□□□□ 0.46
SDR39U1-217ENST00000556249 HMGN5P82970 282 aaKnown RBP17.95■□□□□ 0.46
SDR39U1-217ENST00000556249 ODR4Q5SWX8 454 aa17.95■□□□□ 0.46
SDR39U1-217ENST00000556249 TMTC3Q6ZXV5 915 aa17.95■□□□□ 0.46
SDR39U1-217ENST00000556249 CCDC60Q8IWA6 550 aaPredicted RBP17.95■□□□□ 0.46
SDR39U1-217ENST00000556249 ZDHHC14Q8IZN3 488 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms