RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 BRF1Q92994 677 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 RPGRIP1Q96KN7 1286 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 CDCA3Q99618 268 aaPredicted RBP16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 AAASQ9NRG9 546 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 SNX14Q9Y5W7 946 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 MAGEB2O15479 319 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 PSAPP07602 524 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 DARSP14868 501 aaKnown RBP16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 LAG3P18627 525 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 FGFR4P22455 802 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 EIF4BP23588 611 aaKnown RBP16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 TCF15Q12870 199 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 KRT32Q14532 448 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 ODR4Q5SWX8 454 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 SPOUT1Q5T280 376 aaKnown RBP16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 PDE12Q6L8Q7 609 aaKnown RBP16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 ANKRD54Q6NXT1 300 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 CKAP2LQ8IYA6 745 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 FEZF2Q8TBJ5 459 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 SLC5A5Q92911 643 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 C6orf50Q9HD87 102 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 DENND4AQ7Z401 1863 aa16.25■□□□□ 0.19
CHMP4BP1-201ENST00000556017 CSDE1O75534 798 aaKnown RBP16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 OATP04181 439 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 HSPA4P34932 840 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 EVCP57679 992 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 PRKCEQ02156 737 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 NPY5RQ15761 445 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 SLC39A11Q8N1S5 342 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 PBXIP1Q96AQ6 731 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 TCF25Q9BQ70 676 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 UNC45AQ9H3U1 944 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 DISC1Q9NRI5 854 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 AKT3Q9Y243 479 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 PLXNA3P51805 1871 aa16.24■□□□□ 0.19
CHMP4BP1-201ENST00000556017 A0A0U1RQF3 1178 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 TMEM150BA6NC51 233 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 WDR64B1ANS9 1081 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 M0R2N6 131 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 CDC45O75419 566 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 PSMD10O75832 226 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 HMGB1P09429 215 aaKnown RBP16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 IFNAR1P17181 557 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 VCPP55072 806 aaKnown RBP16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 SIGLEC14Q08ET2 396 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 MCTP2Q6DN12 878 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 TMEM173Q86WV6 379 aaPredicted RBP16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 FAM167AQ96KS9 214 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 JAKMIP1Q96N16 626 aaKnown RBP16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 NCOA5Q9HCD5 579 aaKnown RBP16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 VPS54Q9P1Q0 977 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 VPS13AQ96RL7 3174 aa16.23■□□□□ 0.19
CHMP4BP1-201ENST00000556017 ZFHX2Q9C0A1 2572 aaPredicted RBP16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 IGKV6-21A0A0C4DH24 114 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 CCDC196A0A1B0GTZ2 297 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 RPS6KB1P23443 525 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 GNA11P29992 359 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 TECP42680 631 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 LLGL2Q6P1M3 1020 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 LRRC43Q8N309 656 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 FBXL6Q8N531 539 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 HELQQ8TDG4 1101 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 CCDC136Q96JN2 1154 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 ZNF558Q96NG5 402 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 RIT2Q99578 217 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 APOL5Q9BWW9 433 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 RNF26Q9BY78 433 aaPredicted RBP16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 NGRNQ9NPE2 291 aaKnown RBP16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 CEP131Q9UPN4 1083 aa16.22■□□□□ 0.19
CHMP4BP1-201ENST00000556017 C2orf16Q68DN1 1984 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 C2orf71A6NGG8 1288 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 MEIS3P2A8K0S8 358 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 B4GALT3O60512 393 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 PDGFBP01127 241 aaPredicted RBP16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 PDIA3P30101 505 aaKnown RBP16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 USP11P51784 963 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 PTPN21Q16825 1174 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 CENPQQ7L2Z9 268 aaPredicted RBP16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 MRPL43Q8N983 215 aaKnown RBP16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 CCDC12Q8WUD4 166 aaPredicted RBP16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 BCL7CQ8WUZ0 217 aaPredicted RBP16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 MBOAT7Q96N66 472 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 MAP7D2Q96T17 732 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 SH2D3AQ9BRG2 576 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 NIFKQ9BYG3 293 aaKnown RBP16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 ENTPD7Q9NQZ7 604 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 SPG21Q9NZD8 308 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 HCFC2Q9Y5Z7 792 aa16.21■□□□□ 0.19
CHMP4BP1-201ENST00000556017 CYP3A7-CYP3A51PA0A087WV96 503 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 FSD2A1L4K1 749 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 NT5C1B-RDH14C9J2C7 533 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 HOXA2O43364 376 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 TDP2O95551 362 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 CYP3A7P24462 503 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 TOB2Q14106 344 aaPredicted RBP16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 BLOC1S2Q6QNY1 142 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 TBCKQ8TEA7 893 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 TRAIPQ9BWF2 469 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms