RNA–Protein interactions for RNA: ENST00000555934.1

LINC00643-204, long intergenic non-protein coding RNA 643, humanhuman

TSL 2

Gene LINC00643, Length 1,184 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-204ENST00000555934 FAM129CQ86XR2 697 aa7.62□□□□□ -1.19
LINC00643-204ENST00000555934 WDR75Q8IWA0 830 aaKnown RBP7.62□□□□□ -1.19
LINC00643-204ENST00000555934 TTLL6Q8N841 843 aa7.62□□□□□ -1.19
LINC00643-204ENST00000555934 LINC00482Q8N8I6 264 aa7.62□□□□□ -1.19
LINC00643-204ENST00000555934 RTFDC1Q9BY42 306 aaPredicted RBP7.62□□□□□ -1.19
LINC00643-204ENST00000555934 EPB41L4AQ9HCS5 686 aaPredicted RBP7.62□□□□□ -1.19
LINC00643-204ENST00000555934 LUC7LQ9NQ29 371 aaKnown RBP7.62□□□□□ -1.19
LINC00643-204ENST00000555934 ZNF180Q9UJW8 692 aa7.62□□□□□ -1.19
LINC00643-204ENST00000555934 CDC42EP3Q9UKI2 254 aa7.62□□□□□ -1.19
LINC00643-204ENST00000555934 INVSQ9Y283 1065 aa7.62□□□□□ -1.19
LINC00643-204ENST00000555934 MRFAP1Q9Y605 127 aa7.62□□□□□ -1.19
LINC00643-204ENST00000555934 KLHL33A6NCF5 533 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 KRT1P04264 644 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 CELA3BP08861 270 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 CT47B1P0C2W7 299 aaPredicted RBP7.61□□□□□ -1.19
LINC00643-204ENST00000555934 BCAR1P56945 870 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 JAG1P78504 1218 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 NFE2Q16621 373 aaPredicted RBP7.61□□□□□ -1.19
LINC00643-204ENST00000555934 DPP8Q6V1X1 898 aaPredicted RBP7.61□□□□□ -1.19
LINC00643-204ENST00000555934 OTOP2Q7RTS6 562 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 PPM1NQ8N819 430 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 BHLHE22Q8NFJ8 381 aaPredicted RBP7.61□□□□□ -1.19
LINC00643-204ENST00000555934 FNIP1Q8TF40 1166 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 JADE3Q92613 823 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 PWWP2AQ96N64 755 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 ORAI2Q96SN7 254 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 NOL10Q9BSC4 688 aaKnown RBP7.61□□□□□ -1.19
LINC00643-204ENST00000555934 SPATA6Q9NWH7 488 aaPredicted RBP7.61□□□□□ -1.19
LINC00643-204ENST00000555934 FTSJ1Q9UET6 329 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 TMPRSS11EQ9UL52 423 aa7.61□□□□□ -1.19
LINC00643-204ENST00000555934 CNOT6Q9ULM6 557 aaKnown RBP7.61□□□□□ -1.19
LINC00643-204ENST00000555934 TCAF2A6NFQ2 919 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 TRIM75PA6NK02 468 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 OPHN1O60890 802 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 TSPAN15O95858 294 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 PFKMP08237 780 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 ZSCAN20P17040 1043 aaPredicted RBP7.6□□□□□ -1.19
LINC00643-204ENST00000555934 ANTXR2P58335 489 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 NFATC3Q12968 1075 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 STILQ15468 1287 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 LYSMD2Q8IV50 215 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 ADGRG2Q8IZP9 1017 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 TEKT5Q96M29 485 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 WRNIP1Q96S55 665 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 SLC13A1Q9BZW2 595 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 DENND2AQ9ULE3 1009 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 KCTD3Q9Y597 815 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 GPR45Q9Y5Y3 372 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 NUMBLQ9Y6R0 609 aa7.6□□□□□ -1.19
LINC00643-204ENST00000555934 H0Y858 1186 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 DDX3XO00571 662 aaKnown RBP eCLIP7.59□□□□□ -1.19
LINC00643-204ENST00000555934 TSPAN6O43657 245 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 C1QTNF9P0C862 333 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 RECQLP46063 649 aaPredicted RBP7.59□□□□□ -1.19
LINC00643-204ENST00000555934 HTRA3P83110 453 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 EFCAB2Q5VUJ9 269 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 KCNK18Q7Z418 384 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 CHPFQ8IZ52 775 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 OR5AN1Q8NGI8 311 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 ZNF526Q8TF50 670 aaPredicted RBP7.59□□□□□ -1.19
LINC00643-204ENST00000555934 GAB3Q8WWW8 586 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 JPH3Q8WXH2 748 aaPredicted RBP7.59□□□□□ -1.19
LINC00643-204ENST00000555934 ZCCHC14Q8WYQ9 949 aaKnown RBP7.59□□□□□ -1.19
LINC00643-204ENST00000555934 RHOBTB2Q9BYZ6 727 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 PRSS50Q9UI38 385 aa7.59□□□□□ -1.19
LINC00643-204ENST00000555934 SMG5Q9UPR3 1016 aaKnown RBP7.59□□□□□ -1.19
LINC00643-204ENST00000555934 A0A1B0GTL3 188 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 KNG1P01042 644 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 PF4V1P10720 104 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 COL6A1P12109 1028 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 AGXTP21549 392 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 IL13P35225 146 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 MTNR1BP49286 362 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 KCNQ1P51787 676 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 GRAMD4Q6IC98 578 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 AUTS2Q8WXX7 1259 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 RAX2Q96IS3 184 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 CDH19Q9H159 772 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 KCMF1Q9P0J7 381 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 DNAI1Q9UI46 699 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 PCDHB6Q9Y5E3 794 aa7.58□□□□□ -1.2
LINC00643-204ENST00000555934 A0A0A6YYJ9 748 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 ABLIM3O94929 683 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 IL33O95760 270 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 C8AP07357 584 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 C5AR1P21730 350 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 STAT5BP51692 787 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 MRPS9P82933 396 aaKnown RBP7.57□□□□□ -1.2
LINC00643-204ENST00000555934 PKN1Q16512 942 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 DGKDQ16760 1214 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 VMACQ2NL98 169 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 GAREM2Q75VX8 874 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 TPH2Q8IWU9 490 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 CPA6Q8N4T0 437 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 CDYL2Q8N8U2 506 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 NUDT10Q8NFP7 164 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 OR14C36Q8NHC7 312 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 NUDT11Q96G61 164 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 DYDC2Q96IM9 177 aa7.57□□□□□ -1.2
LINC00643-204ENST00000555934 PITHD1Q9GZP4 211 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms