RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 GOLGA8CPA6NN73 597 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 HMGB1P1B2RPK0 211 aaPredicted RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 CCDC188H7C350 402 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 RAD51CO43502 376 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 NDUFB10O96000 172 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 CYP3A4P08684 503 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 LMNB1P20700 586 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 HOXA13P31271 388 aaPredicted RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 HOXD13P35453 343 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 CCT5P48643 541 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 MMP14P50281 582 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 CACNB3P54284 484 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 NPEPPSP55786 919 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 JAM2P57087 298 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 FKBP1AP62942 108 aaKnown RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 SKIDA1Q1XH10 827 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 TTMPQ5BVD1 217 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 RBM26Q5T8P6 1007 aaKnown RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 STRIP1Q5VSL9 837 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 TATDN1Q6P1N9 297 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 B4GALNT4Q76KP1 1039 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 HS2ST1Q7LGA3 356 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 CD302Q8IX05 232 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 FAM186BQ8IYM0 893 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 MYCT1Q8N699 235 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 LRRC57Q8N9N7 239 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 TPCN2Q8NHX9 752 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 CASKIN2Q8WXE0 1202 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 ZNF622Q969S3 477 aaKnown RBP eCLIP7.62□□□□□ -1.19
TDP1-213ENST00000555880 SLC35C1Q96A29 364 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 LRRC45Q96CN5 670 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.62□□□□□ -1.192e-6■■□□□ 12.6
TDP1-213ENST00000555880 RUSC1Q9BVN2 902 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 DBNDD1Q9H9R9 158 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 PARVGQ9HBI0 331 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 TUFT1Q9NNX1 390 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 SUCLA2Q9P2R7 463 aaPredicted RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 SEL1LQ9UBV2 794 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 VAV3Q9UKW4 847 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 FRMD4BQ9Y2L6 1034 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 MYH11P35749 1972 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 ZSCAN5CA6NGD5 496 aaPredicted RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 H0YIN7 160 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 GCOM1H8Y6P7 765 aaPredicted RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 PIK3CDO00329 1044 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 KRIT1O00522 736 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 NDUFAB1O14561 156 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 CLIC2O15247 247 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 GDF11O95390 407 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 KRT14P02533 472 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 FAM153BP0C7A2 387 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 MYZAPP0CAP1 466 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 HSPA9P38646 679 aaKnown RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 SNAP25P60880 206 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 MTMR3Q13615 1198 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 CLUL1Q15846 466 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 FAM153CQ494X1 144 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 TTC31Q49AM3 519 aaPredicted RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 LRCH2Q5VUJ6 765 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 MSL1Q68DK7 614 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 KCTD16Q68DU8 428 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 LRIG3Q6UXM1 1119 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 KDM7AQ6ZMT4 941 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 DAAM2Q86T65 1068 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 SPATS2Q86XZ4 545 aaKnown RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 TPH2Q8IWU9 490 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 IQCKQ8N0W5 287 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 ARFGAP2Q8N6H7 521 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 C1orf131Q8NDD1 294 aaKnown RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 CCDC26Q8TAB7 109 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 U2AF1L4Q8WU68 220 aaKnown RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 ARL8AQ96BM9 186 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 ATP6V1G3Q96LB4 118 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 MKNK1Q9BUB5 465 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 ISCUQ9H1K1 167 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 TMEM51Q9NW97 253 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 FAM198AQ9UFP1 575 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 FAM153AQ9UHL3 310 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 TMEM59LQ9UK28 342 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 SERPINA10Q9UK55 444 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 SYNPO2Q9UMS6 1093 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 NOC2LQ9Y3T9 749 aaKnown RBP7.62□□□□□ -1.19
TDP1-213ENST00000555880 DAAM1Q9Y4D1 1078 aa7.62□□□□□ -1.19
TDP1-213ENST00000555880 SLX4Q8IY92 1834 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 GRIN2DO15399 1336 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 A0A087WUV0 522 aaPredicted RBP7.61□□□□□ -1.19
TDP1-213ENST00000555880 ZNF233A6NK53 670 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 RSPH10B2B2RC85 870 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 CHMP2AO43633 222 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 GAS7O60861 476 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 KIAA0754O94854 1291 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 GH2P01242 217 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 RSPH10BP0C881 870 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 NR1D1P20393 614 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 MUTP22033 750 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 SOX5P35711 763 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 CASP4P49662 377 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 STAT2P52630 851 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 SLC15A2Q16348 729 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 NFIL3Q16649 462 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms