RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 IFRD2Q12894 506 aaPredicted RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 PFKFB3Q16875 520 aaPredicted RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 SLFN13Q68D06 897 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 CPXCR1Q8N123 301 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 S100BP04271 92 aaPredicted RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 LCA5Q86VQ0 697 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 DGKHQ86XP1 1220 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 MCUQ8NE86 351 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 NGLY1Q96IV0 654 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 PNKPQ96T60 521 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 RANBP17Q9H2T7 1088 aaKnown RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 FBXO2Q9UK22 296 aaPredicted RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 RNF103-CHMP3A0A140T963 221 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 KCNA6P17658 529 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 SERPINB3P29508 390 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 ARL4AP40617 200 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 CNGA3Q16281 694 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 TAF1BQ53T94 588 aaPredicted RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 NUDCD3Q8IVD9 361 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 FAF2Q96CS3 445 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 SNUPNO95149 360 aaKnown RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 SLC18A3Q16572 532 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 RAD54LQ92698 747 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 ALKBH8Q96BT7 664 aaKnown RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 PIGSQ96S52 555 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 RBM12Q9NTZ6 932 aaKnown RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 FOXN1O15353 648 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 MYCNP04198 464 aaPredicted RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 FMR1Q06787 632 aaKnown RBP eCLIP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 STRBPQ96SI9 672 aaKnown RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 ARHGAP26Q9UNA1 814 aa18.7■□□□□ 0.58
SYNE3-204ENST00000555759 THRAP3Q9Y2W1 955 aaKnown RBP18.7■□□□□ 0.58
SYNE3-204ENST00000555759 SYCE1LA8MT33 242 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 TMED10P49755 219 aaKnown RBP18.69■□□□□ 0.58
SYNE3-204ENST00000555759 OCRLQ01968 901 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 NCAPHQ15003 741 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 TBC1D9BQ66K14 1250 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 PODNQ7Z5L7 613 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 IL1RAPL1Q9NZN1 696 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 MAP3K15Q6ZN16 1313 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 UBN2Q6ZU65 1347 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
SYNE3-204ENST00000555759 KIF28PB7ZC32 967 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 GOLGA8SH3BPF8 625 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 PRPSAP2O60256 369 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 DEAF1O75398 565 aaPredicted RBP18.69■□□□□ 0.58
SYNE3-204ENST00000555759 ATP2C1P98194 919 aaPredicted RBP18.69■□□□□ 0.58
SYNE3-204ENST00000555759 ZNF211Q13398 564 aaPredicted RBP18.69■□□□□ 0.58
SYNE3-204ENST00000555759 SLC44A4Q53GD3 710 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 FBXL13Q8NEE6 735 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 ZNF564Q8TBZ8 553 aaPredicted RBP18.69■□□□□ 0.58
SYNE3-204ENST00000555759 ERP27Q96DN0 273 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 TRABDQ9H4I3 376 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.69■□□□□ 0.581e-7■■■□□ 18.9
SYNE3-204ENST00000555759 A0A1W2PQJ5 194 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 SERPINB10P48595 397 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 KLC3Q6P597 504 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 KDM4CQ9H3R0 1056 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 KIF9Q9HAQ2 790 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 FAM129AQ9BZQ8 928 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 PCIF1Q9H4Z3 704 aa18.69■□□□□ 0.58
SYNE3-204ENST00000555759 PRKAB2O43741 272 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 NR3C1P04150 777 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 TAC1P20366 129 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 THOC5Q13769 683 aaKnown RBP18.68■□□□□ 0.58
SYNE3-204ENST00000555759 TFDP2Q14188 446 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 FOXP3Q9BZS1 431 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 SUGCTQ9HAC7 445 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 LAMC1P11047 1609 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 DISP1Q96F81 1524 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 PLEKHA8P1O95397 391 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 ZYXQ15942 572 aaKnown RBP18.68■□□□□ 0.58
SYNE3-204ENST00000555759 RBM43Q6ZSC3 357 aaKnown RBP18.68■□□□□ 0.58
SYNE3-204ENST00000555759 KMT5AQ9NQR1 393 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 ZFATQ9P243 1243 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 FGFR4P22455 802 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 BTDP43251 543 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 MFSD14BQ5SR56 506 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 SGMS1Q86VZ5 419 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 CHCHD3Q9NX63 227 aaKnown RBP18.68■□□□□ 0.58
SYNE3-204ENST00000555759 PHF2O75151 1096 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 APOA1P02647 267 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 KRT4P19013 534 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 PSMC1P62191 440 aaKnown RBP18.68■□□□□ 0.58
SYNE3-204ENST00000555759 ZNF577Q9BSK1 485 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 LY9Q9HBG7 655 aa18.68■□□□□ 0.58
SYNE3-204ENST00000555759 TESPA1A2RU30 521 aaPredicted RBP18.67■□□□□ 0.58
SYNE3-204ENST00000555759 FAM47DPA6NHR8 397 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 TTLL1O95922 423 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 CHEK2O96017 543 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 NQO1P15559 274 aaKnown RBP18.67■□□□□ 0.58
SYNE3-204ENST00000555759 ITIH2P19823 946 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 SCTRP47872 440 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 EXOSC10Q01780 885 aaKnown RBP18.67■□□□□ 0.58
SYNE3-204ENST00000555759 TRAPPC3LQ5T215 181 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 DTX3LQ8TDB6 740 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 ATP6V0A1Q93050 837 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 GGT7Q9UJ14 662 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 WDR64B1ANS9 1081 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 ANP32DO95626 131 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms