RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 HAS1Q92839 578 aa27.42■■□□□ 1.98
PRKCH-216ENST00000555542 JPH2Q9BR39 696 aaPredicted RBP27.42■■□□□ 1.98
PRKCH-216ENST00000555542 ATP6V0A4Q9HBG4 840 aa27.42■■□□□ 1.98
PRKCH-216ENST00000555542 STBD1O95210 358 aa27.41■■□□□ 1.98
PRKCH-216ENST00000555542 KCNA5P22460 613 aa27.41■■□□□ 1.98
PRKCH-216ENST00000555542 CDC42EP1Q00587 391 aa27.41■■□□□ 1.98
PRKCH-216ENST00000555542 DRP2Q13474 957 aa27.41■■□□□ 1.98
PRKCH-216ENST00000555542 SAFBQ15424 915 aaKnown RBP eCLIP27.41■■□□□ 1.98
PRKCH-216ENST00000555542 ANO5Q75V66 913 aa27.41■■□□□ 1.98
PRKCH-216ENST00000555542 TNFRSF25Q93038 417 aa27.41■■□□□ 1.98
PRKCH-216ENST00000555542 NECAB3Q96P71 396 aaPredicted RBP27.41■■□□□ 1.98
PRKCH-216ENST00000555542 GCOM2Q9BZD3 368 aaPredicted RBP27.41■■□□□ 1.98
PRKCH-216ENST00000555542 ALG13Q9NP73 1137 aaKnown RBP27.41■■□□□ 1.98
PRKCH-216ENST00000555542 DARSP14868 501 aaKnown RBP27.4■■□□□ 1.98
PRKCH-216ENST00000555542 EPHA7Q15375 998 aa27.4■■□□□ 1.98
PRKCH-216ENST00000555542 CALCRLQ16602 461 aa27.4■■□□□ 1.98
PRKCH-216ENST00000555542 RHPN2Q8IUC4 686 aa27.4■■□□□ 1.98
PRKCH-216ENST00000555542 LXNQ9BS40 222 aa27.4■■□□□ 1.98
PRKCH-216ENST00000555542 CYP26B1Q9NR63 512 aa27.4■■□□□ 1.98
PRKCH-216ENST00000555542 TMEM161AQ9NX61 479 aa27.4■■□□□ 1.98
PRKCH-216ENST00000555542 SUCLA2Q9P2R7 463 aaPredicted RBP27.4■■□□□ 1.98
PRKCH-216ENST00000555542 FNDC1Q4ZHG4 1894 aaPredicted RBP27.39■■□□□ 1.98
PRKCH-216ENST00000555542 FGFR4P22455 802 aa27.39■■□□□ 1.98
PRKCH-216ENST00000555542 GUCY1B3Q02153 619 aa27.39■■□□□ 1.98
PRKCH-216ENST00000555542 ST3GAL1Q11201 340 aa27.39■■□□□ 1.98
PRKCH-216ENST00000555542 DSC3Q14574 896 aa27.39■■□□□ 1.98
PRKCH-216ENST00000555542 FAM102BQ5T8I3 360 aa27.39■■□□□ 1.98
PRKCH-216ENST00000555542 SLC7A3Q8WY07 619 aa27.39■■□□□ 1.98
PRKCH-216ENST00000555542 P2RX5Q93086 422 aa27.39■■□□□ 1.98
PRKCH-216ENST00000555542 CEP170P1Q96L14 293 aa27.39■■□□□ 1.98
PRKCH-216ENST00000555542 AAASQ9NRG9 546 aa27.39■■□□□ 1.98
PRKCH-216ENST00000555542 SPTBN5Q9NRC6 3674 aaKnown RBP27.38■■□□□ 1.97
PRKCH-216ENST00000555542 MAFO75444 373 aaPredicted RBP27.38■■□□□ 1.97
PRKCH-216ENST00000555542 FGFR1P11362 822 aa27.38■■□□□ 1.97
PRKCH-216ENST00000555542 POLGP54098 1239 aaPredicted RBP27.38■■□□□ 1.97
PRKCH-216ENST00000555542 C8orf34Q49A92 452 aa27.38■■□□□ 1.97
PRKCH-216ENST00000555542 NAALADL2Q58DX5 795 aa27.38■■□□□ 1.97
PRKCH-216ENST00000555542 ABI1Q8IZP0 508 aa27.38■■□□□ 1.97
PRKCH-216ENST00000555542 RNF169Q8NCN4 708 aa27.38■■□□□ 1.97
PRKCH-216ENST00000555542 NLRP4Q96MN2 994 aa27.38■■□□□ 1.97
PRKCH-216ENST00000555542 CEP89Q96ST8 783 aa27.38■■□□□ 1.97
PRKCH-216ENST00000555542 ELAC1Q9H777 363 aaKnown RBP27.38■■□□□ 1.97
PRKCH-216ENST00000555542 PLAGL2Q9UPG8 496 aa27.38■■□□□ 1.97
PRKCH-216ENST00000555542 PCDHB12Q9Y5F1 795 aa27.38■■□□□ 1.97
PRKCH-216ENST00000555542 XIRP2A4UGR9 3374 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 A0A087WZ62 844 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 IGKV6-21A0A0C4DH24 114 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 NEMFO60524 1076 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 CSDE1O75534 798 aaKnown RBP27.37■■□□□ 1.97
PRKCH-216ENST00000555542 NPEPPSP55786 919 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 CYP4A11Q02928 519 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 OTUD6AQ7L8S5 288 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 KLHL23Q8NBE8 558 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 DYDC2Q96IM9 177 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 C8orf76Q96K31 380 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 ZSCAN31Q96LW9 406 aaPredicted RBP27.37■■□□□ 1.97
PRKCH-216ENST00000555542 FDXACB1Q9BRP7 624 aaPredicted RBP27.37■■□□□ 1.97
PRKCH-216ENST00000555542 RGL1Q9NZL6 768 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 PCDHA12Q9UN75 941 aa27.37■■□□□ 1.97
PRKCH-216ENST00000555542 ATG2AQ2TAZ0 1938 aa27.36■■□□□ 1.97
PRKCH-216ENST00000555542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.36■■□□□ 1.97
PRKCH-216ENST00000555542 HOXA2O43364 376 aa27.36■■□□□ 1.97
PRKCH-216ENST00000555542 ATP2B1P20020 1258 aa27.36■■□□□ 1.97
PRKCH-216ENST00000555542 SFPQP23246 707 aaKnown RBP eCLIP27.36■■□□□ 1.97
PRKCH-216ENST00000555542 YWHABP31946 246 aaKnown RBP27.36■■□□□ 1.97
PRKCH-216ENST00000555542 CTTNQ14247 550 aaKnown RBP27.36■■□□□ 1.97
PRKCH-216ENST00000555542 ZNF410Q86VK4 478 aa27.36■■□□□ 1.97
PRKCH-216ENST00000555542 TPH2Q8IWU9 490 aa27.36■■□□□ 1.97
PRKCH-216ENST00000555542 C4orf19Q8IY42 314 aa27.36■■□□□ 1.97
PRKCH-216ENST00000555542 EXOC8Q8IYI6 725 aa27.36■■□□□ 1.97
PRKCH-216ENST00000555542 LLPHQ9BRT6 129 aaKnown RBP27.36■■□□□ 1.97
PRKCH-216ENST00000555542 INO80BQ9C086 356 aaPredicted RBP27.36■■□□□ 1.97
PRKCH-216ENST00000555542 ZSWIM4Q9H7M6 989 aa27.36■■□□□ 1.97
PRKCH-216ENST00000555542 BMP2KQ9NSY1 1161 aaPredicted RBP27.36■■□□□ 1.97
PRKCH-216ENST00000555542 CLDND1Q9NY35 253 aa27.36■■□□□ 1.97
PRKCH-216ENST00000555542 DACT1Q9NYF0 836 aa27.36■■□□□ 1.97
PRKCH-216ENST00000555542 WRAP73Q9P2S5 460 aaPredicted RBP27.36■■□□□ 1.97
PRKCH-216ENST00000555542 ITGB1P05556 798 aa27.35■■□□□ 1.97
PRKCH-216ENST00000555542 FAM189BP81408 668 aa27.35■■□□□ 1.97
PRKCH-216ENST00000555542 FAM184AQ8NB25 1140 aa27.35■■□□□ 1.97
PRKCH-216ENST00000555542 PABPC5Q96DU9 382 aaKnown RBP27.35■■□□□ 1.97
PRKCH-216ENST00000555542 TTC12Q9H892 705 aaPredicted RBP27.35■■□□□ 1.97
PRKCH-216ENST00000555542 SH2B1Q9NRF2 756 aaPredicted RBP27.35■■□□□ 1.97
PRKCH-216ENST00000555542 PPME1Q9Y570 386 aa27.35■■□□□ 1.97
PRKCH-216ENST00000555542 RFC5P40937 340 aa27.34■■□□□ 1.97
PRKCH-216ENST00000555542 TXKP42681 527 aa27.34■■□□□ 1.97
PRKCH-216ENST00000555542 SPIRE1Q08AE8 756 aa27.34■■□□□ 1.97
PRKCH-216ENST00000555542 GNL2Q13823 731 aaKnown RBP27.34■■□□□ 1.97
PRKCH-216ENST00000555542 LEXMQ3ZCV2 418 aa27.34■■□□□ 1.97
PRKCH-216ENST00000555542 XKR9Q5GH70 373 aa27.34■■□□□ 1.97
PRKCH-216ENST00000555542 ECHDC2Q86YB7 292 aa27.34■■□□□ 1.97
PRKCH-216ENST00000555542 KSR1Q8IVT5 923 aa27.34■■□□□ 1.97
PRKCH-216ENST00000555542 PPP2R3CQ969Q6 453 aa27.34■■□□□ 1.97
PRKCH-216ENST00000555542 CCDC43Q96MW1 224 aaKnown RBP27.34■■□□□ 1.97
PRKCH-216ENST00000555542 TMEM117Q9H0C3 514 aa27.34■■□□□ 1.97
PRKCH-216ENST00000555542 TYW1Q9NV66 732 aaKnown RBP27.34■■□□□ 1.97
PRKCH-216ENST00000555542 H3BQ06 376 aaPredicted RBP27.33■■□□□ 1.97
PRKCH-216ENST00000555542 NCK2O43639 380 aa27.33■■□□□ 1.97
PRKCH-216ENST00000555542 HMGN5P82970 282 aaKnown RBP27.33■■□□□ 1.97
PRKCH-216ENST00000555542 THNSL1Q8IYQ7 743 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms