RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 SART3Q15020 963 aaKnown RBP9.54□□□□□ -0.88
NEK9-206ENST00000555537 ZNF484Q5JVG2 852 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 PDXDC2PQ6P474 469 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 HEATR3Q7Z4Q2 680 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 SMC5Q8IY18 1101 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 CKAP2LQ8IYA6 745 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 RSAD2Q8WXG1 361 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 CNTNAP3BQ96NU0 1288 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 CNTNAP3Q9BZ76 1288 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 ZNF302Q9NR11 478 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 USTQ9Y2C2 406 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 EVPLQ92817 2033 aa9.54□□□□□ -0.88
NEK9-206ENST00000555537 KRBA1A5PL33 1030 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 HOXA2O43364 376 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 ALDH7A1P49419 539 aaKnown RBP9.53□□□□□ -0.88
NEK9-206ENST00000555537 SLC26A2P50443 739 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 NUCB1Q02818 461 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 CEP55Q53EZ4 464 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 SPECC1Q5M775 1068 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 FAM160B1Q5W0V3 765 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 TYW1BQ6NUM6 668 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 EFCAB12Q6NXP0 572 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 NFXL1Q6ZNB6 911 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 GPR149Q86SP6 731 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 CABP7Q86V35 215 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 MB21D2Q8IYB1 491 aaPredicted RBP9.53□□□□□ -0.88
NEK9-206ENST00000555537 LRRC71Q8N4P6 559 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 ST13P5Q8NFI4 369 aaPredicted RBP9.53□□□□□ -0.88
NEK9-206ENST00000555537 BCL7CQ8WUZ0 217 aaPredicted RBP9.53□□□□□ -0.88
NEK9-206ENST00000555537 ACSF2Q96CM8 615 aaPredicted RBP9.53□□□□□ -0.88
NEK9-206ENST00000555537 TMEM169Q96HH4 297 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 MAP3K14Q99558 947 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 HINFPQ9BQA5 517 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 RTP3Q9BQQ7 232 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 LZTS2Q9BRK4 669 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 ZBP1Q9H171 429 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 CA14Q9ULX7 337 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 DUSP12Q9UNI6 340 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 AKT3Q9Y243 479 aa9.53□□□□□ -0.88
NEK9-206ENST00000555537 SPDYE4A6NLX3 237 aa9.52□□□□□ -0.89
NEK9-206ENST00000555537 MEIS1O00470 390 aa9.52□□□□□ -0.89
NEK9-206ENST00000555537 DHX15O43143 795 aaKnown RBP9.52□□□□□ -0.89
NEK9-206ENST00000555537 N4BP1O75113 896 aaKnown RBP9.52□□□□□ -0.89
NEK9-206ENST00000555537 ZC3H11AO75152 810 aaKnown RBP eCLIP9.52□□□□□ -0.89
NEK9-206ENST00000555537 DDAH1O94760 285 aa9.52□□□□□ -0.89
NEK9-206ENST00000555537 SSBP05455 408 aaKnown RBP eCLIP9.52□□□□□ -0.89
NEK9-206ENST00000555537 DCNP07585 359 aaKnown RBP9.52□□□□□ -0.89
NEK9-206ENST00000555537 CTSAP10619 480 aa9.52□□□□□ -0.89
NEK9-206ENST00000555537 EIF4BP23588 611 aaKnown RBP9.52□□□□□ -0.89
NEK9-206ENST00000555537 ZNF76P36508 570 aa9.52□□□□□ -0.89
NEK9-206ENST00000555537 GNAQP50148 359 aa9.52□□□□□ -0.89
NEK9-206ENST00000555537 PUM1Q14671 1186 aaKnown RBP eCLIP9.52□□□□□ -0.89
NEK9-206ENST00000555537 BMS1Q14692 1282 aaKnown RBP9.52□□□□□ -0.89
NEK9-206ENST00000555537 OTOP3Q7RTS5 596 aa9.52□□□□□ -0.89
NEK9-206ENST00000555537 ZNF598Q86UK7 904 aaKnown RBP9.52□□□□□ -0.89
NEK9-206ENST00000555537 LPPQ93052 612 aa9.52□□□□□ -0.89
NEK9-206ENST00000555537 ADAMTS10Q9H324 1103 aa9.52□□□□□ -0.89
NEK9-206ENST00000555537 DZANK1Q9NVP4 752 aa9.52□□□□□ -0.89
NEK9-206ENST00000555537 COL1A2P08123 1366 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 FAM186AA6NE01 2351 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 A0A0U1RQF3 1178 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 CCDC69A6NI79 296 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 MEIS3P2A8K0S8 358 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 FAM86B1E9PN63 330 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 PRC1O43663 620 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 GALTP07902 379 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 FAM86B2P0C5J1 330 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 RFX1P22670 979 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 KLRC2P26717 231 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 RSPO4Q2I0M5 234 aaPredicted RBP9.51□□□□□ -0.89
NEK9-206ENST00000555537 WWC2Q6AWC2 1192 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 MIS18BP1Q6P0N0 1132 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 CASC1Q6TDU7 716 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 CCDC149Q6ZUS6 474 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 DDX53Q86TM3 631 aaKnown RBP9.51□□□□□ -0.89
NEK9-206ENST00000555537 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
NEK9-206ENST00000555537 IGSF21Q96ID5 467 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 KLHL5Q96PQ7 755 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 VN1R3Q9BXE9 311 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 LRRC2Q9BYS8 371 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 ANO3Q9BYT9 981 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 GBP3Q9H0R5 595 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 RWDD1Q9H446 243 aaPredicted RBP9.51□□□□□ -0.89
NEK9-206ENST00000555537 NRDE2Q9H7Z3 1164 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 GABBR1Q9UBS5 961 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 DNAJB4Q9UDY4 337 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 RIF1Q5UIP0 2472 aaKnown RBP9.51□□□□□ -0.89
NEK9-206ENST00000555537 DMXL1Q9Y485 3027 aa9.51□□□□□ -0.89
NEK9-206ENST00000555537 SH2B2O14492 632 aaPredicted RBP9.5□□□□□ -0.89
NEK9-206ENST00000555537 ADAMTS3O15072 1205 aa9.5□□□□□ -0.89
NEK9-206ENST00000555537 B4GALT3O60512 393 aa9.5□□□□□ -0.89
NEK9-206ENST00000555537 CNPP09543 421 aaKnown RBP9.5□□□□□ -0.89
NEK9-206ENST00000555537 SP9P0CG40 484 aa9.5□□□□□ -0.89
NEK9-206ENST00000555537 GSPT1P15170 499 aaKnown RBP9.5□□□□□ -0.89
NEK9-206ENST00000555537 GBP2P32456 591 aaPredicted RBP9.5□□□□□ -0.89
NEK9-206ENST00000555537 LETM2Q2VYF4 491 aa9.5□□□□□ -0.89
NEK9-206ENST00000555537 FAM43BQ6ZT52 329 aaPredicted RBP9.5□□□□□ -0.89
NEK9-206ENST00000555537 PLA2G4DQ86XP0 818 aa9.5□□□□□ -0.89
NEK9-206ENST00000555537 ZNF280BQ86YH2 543 aa9.5□□□□□ -0.89
NEK9-206ENST00000555537 SLC44A3Q8N4M1 653 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms